| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1296905 | NA (NA) | 8 (0.110) | 8/240 | NT | NA | coding (87/1329 nt) | PP_1133 | transposase |
| ? | NC_002947 | = 1296920 | NA (NA) | coding (102/1329 nt) | PP_1133 | transposase | |||||
CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1296750‑1296905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcgtgCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGCGA < NC_002947/1296920‑1296773 CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGGCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT > 1:1399612/1‑150CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT > 2:326548/1‑150CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT > 1:800151/1‑150CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT > 1:1299571/1‑150CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT > 1:1354638/1‑150CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGAAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT > 1:816278/1‑150 ACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATT > 1:136965/1‑150 ACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATT > 1:1493330/1‑150 CGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTT > 2:283019/1‑150 GTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATCGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTC > 1:1126219/1‑150 TATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCG > 2:754422/1‑150 ATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGT > 2:1016469/1‑150 ATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGT < 1:990912/150‑1 TGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG < 2:511045/150‑1 TGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG > 2:1433087/1‑150 TGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG > 1:342904/1‑150 TGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG > 2:175099/1‑150 TGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG < 1:167736/150‑1 TGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG < 2:73541/150‑1 TGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG > 2:54364/1‑150 CCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGGGGATCGACCGCCACGAAAT < 1:719824/150‑1 CGTGTGCACCGCACGGCCTGTATCCTGCGAGGATTAATCATGGCGCGAAAGCCTCCAACGCAAAGCTCTACCGGCCACCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGGGGATCGACCGCCACGAAATG < 1:1571371/150‑1 CCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATT < 1:1518350/114‑1 CCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATT > 2:1518350/1‑114 CCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATT > 2:1518541/1‑114 CCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATT < 1:1518541/114‑1 CCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTC < 2:1425876/115‑1 CCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTC > 1:1425876/1‑115 TTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG > 2:1124526/1‑93 TTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG < 1:1124526/93‑1 TGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCG > 2:1146309/1‑84 TGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCG < 1:1146309/84‑1 GCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTAGAGAGCATTTCGTGCCGGGGATCGACCGCCACGAAATGCTC < 2:1622744/103‑1 GCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTAGAGAGCATTTCGTGCCGGGGATCGACCGCCACGAAATGCTC > 1:1622744/1‑103 CAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGGGGATCGACCGCCACGAA < 2:736667/87‑1 CAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGGGGATCGACCGCCACGAA > 1:736667/1‑87 CGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATT > 2:675429/1‑50 CGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATT < 1:675429/50‑1 ATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGGGGATCGACCGCCACGAAA < 1:1706807/63‑1 ATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGGGGATCGACCGCCACGAAA > 2:1706807/1‑63 TTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCGATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGT > 2:1126219/1‑150 TTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAGGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTG < 1:754185/150‑1 TTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGACGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTG < 1:239171/150‑1 TTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTG < 1:396384/150‑1 TTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTG < 2:721701/150‑1 TTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTG < 2:1870744/150‑1 TTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTG < 1:1195041/150‑1 TTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTG < 1:597988/150‑1 TTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTG < 2:735900/150‑1 TCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGG < 1:1618170/150‑1 CGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGCTGGACGCAGCTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGC < 1:703648/150‑1 CGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGC < 1:867343/150‑1 CGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGC < 1:250589/150‑1 TGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACATGGTG > 2:1045264/1‑146 TGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGCGA > 1:283019/1‑150 TGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGCGA > 1:549731/1‑150 TGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTG < 1:1045264/146‑1 TGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCACGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGCGA > 1:1049870/1‑150 TGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGA > 1:782287/1‑70 TGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGA < 2:782287/70‑1 CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1296750‑1296905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcgtgCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGCGA < NC_002947/1296920‑1296773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |