New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1419553 = | 17 (0.230) | 10 (0.180) | 10/190 | NT | 49.1% | intergenic (‑36/+101) | PP_1242/PP_1244 | hypothetical protein/hypothetical protein |
? | NC_002947 | 1419647 = | 8 (0.140) | intergenic (‑130/+7) | PP_1242/PP_1244 | hypothetical protein/hypothetical protein |
GGGGCTGGTCGAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1419729‑1419553 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGA > NC_002947/1419647‑1419793 GGGGCTGGTCGAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGT < 2:943010/150‑1 GGGCTGGTCGAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTG < 2:1475661/150‑1 GGCTGGTCGAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGG < 1:1018791/150‑1 GGCTGGTCGAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGG < 2:920275/150‑1 GGCTGGTCGAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGG < 1:466189/150‑1 GAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGC < 2:519802/150‑1 GAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGC < 2:1710513/150‑1 GTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCAAAGGACCTGTGGGAGCGGGCGT < 2:465406/150‑1 CGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCAAAGTACCTGTGGGAGCGGGCATGCCCG < 2:1861199/150‑1 TTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCG > 1:1010404/1‑150 TGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGA < 2:37951/150‑1 GATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGA > 2:72488/1‑133 GATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGA < 1:72488/133‑1 cacTTGCCGATGCGGTCGCATTTACCCTCAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCCCAGGGTCAACACGGCCGCCACGTACTGCTCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGG < 2:1010404/147‑1 CCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGA > 1:1595427/1‑96 CCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGA < 2:1595427/96‑1 ACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGT > 1:1800625/1‑100 ACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGT < 2:1800625/100‑1 ATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGT < 1:690742/79‑1 ATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGT > 2:690742/1‑79 GGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGG > 2:275709/1‑117 GGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGG < 1:275709/117‑1 CCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCAT > 1:1344954/1‑136 CCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCAT < 2:1344954/136‑1 GCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGA < 2:228576/96‑1 GCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGA > 1:228576/1‑96 TCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCA > 1:1714530/1‑131 TCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCA < 2:1714530/131‑1 CACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCC > 2:694400/1‑150 GCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGA < 1:694400/150‑1 CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCAT > 2:771400/1‑150 CTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATC > 2:1761731/1‑150 CTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATC > 2:443838/1‑150 CTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCACTGTGGGTAAATGCGACCGCATCTGCAACTCCATCAGCGCCGACTCGACCAGCCCCTGTACCGATTGAATTTTAAGGATCACGACCTGtagc > 2:406876/1‑146 GGCGTGCCCGCAAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCT > 2:508007/1‑150 CGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCCCGTTCGGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGT < 1:1861199/150‑1 CGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATCTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTG < 1:1475661/150‑1 GCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGA < 1:443838/150‑1 GCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGA < 1:508007/150‑1 GCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGA < 1:519802/150‑1 GGGGCTGGTCGAGTCGGCGTTGATGCAGTTGCAGATGCGGTCGCATTTACCCACAGAGCCTCACACCTTGCATTAGCAGGTCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGTCACCACAGCCGTCACGCACTGCACAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1419729‑1419553 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGA > NC_002947/1419647‑1419793 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |