| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1443111 = | 66 (0.880) | 9 (0.150) | 9/204 | NT | 18.2% | intergenic (‑42/+134) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
| ? | NC_002947 | 1443179 = | 28 (0.470) | intergenic (‑110/+66) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator | |||||
CTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1443277‑1443111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggcttgcccgcgaaggTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCG > NC_002947/1443179‑1443319 CTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGC < 1:287929/150‑1 GAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGG < 1:285731/150‑1 AAACCCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGG < 2:1802404/150‑1 AAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGG < 1:364173/150‑1 AACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAG < 1:1164749/141‑1 AACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAG > 2:1164749/1‑141 ACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGA < 2:1814760/142‑1 ACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGA > 1:1814760/1‑142 CCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGC > 1:1245989/1‑150 CCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTCCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGC > 1:1247611/1‑150 GCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGG < 1:15194/150‑1 ATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGG > 2:1180408/1‑132 ATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGG < 1:1180408/132‑1 AACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGG > 2:11617/1‑126 AACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGG < 1:11617/126‑1 ATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGG > 2:842374/1‑92 ATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGG < 1:842374/92‑1 CCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGG < 1:256393/145‑1 CCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGG > 2:256393/1‑145 CCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTC > 2:1770191/1‑150 CGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACA > 1:511373/1‑62 CGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACA < 2:511373/62‑1 CTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGC < 1:1923897/104‑1 CTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGC > 2:1923897/1‑104 TACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTG > 2:809195/1‑150 CCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAA < 1:1770191/150‑1 TAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTC < 2:1621098/150‑1 tcGCGGGCAAGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCGTTGTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGTTAGAATCTCTGG > 2:1050973/3‑150 GCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGACCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCA > 1:1321232/1‑150 CGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGA > 1:1687618/1‑106 CGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGA < 2:1687618/106‑1 TTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTT > 2:1669613/1‑107 TTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAAGGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTT < 1:1669613/107‑1 CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGC > 2:86175/1‑150 CCGCGAAGGTCCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCG > 2:1658030/1‑150 CTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1443277‑1443111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggcttgcccgcgaaggTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCG > NC_002947/1443179‑1443319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |