| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1510373 = | 66 (0.880) | 9 (0.130) | 8/238 | NT | 12.6% | pseudogene (1236/1851 nt) | PP_1325 | putative lipoprotein |
| ? | NC_002947 | 1510397 = | 63 (0.900) | pseudogene (1212/1851 nt) | PP_1325 | putative lipoprotein | |||||
GGCGCCGCCACAACTGTTCCAGTTCGGCCTGGCTGCCGAGGACGAAGCCCGCGAAGTGGCCCGCCGCGCCCGCGCCGATGGCATGGTCCGCGCCGTTGCCCTGGTGCCGAGCGGCGAATGGGGTGACCGTGTCCTGGCCGCCTTCCGCCAGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1510526‑1510373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggacACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTTGTGGCGGCGCCTTCTGGCCAGCGTCG > NC_002947/1510397‑1510541 GGCGCCGCCACAACTGTTCCAGTTCGGCCTGGCTGCCGAGGACGAAGCCCGCGAAGTGGCCCGCCGCGCCCGCGCCGATGGCATGGTCCGCGCCGTTGCCCTGGTGCCGAGCGGCGAATGGGGTGACCGTGTCCTGGCCTCCTTCCGCCA < 2:286586/150‑1GGCGCCGCCACAACTGTTCCAGTTCGGCCTGGCTGCCGAGGACGAAGCCCGCGAAGTGGCCCGCCGCGCCCGCGCCGATGGCATGGTCCGCGCCGTTGCCCTGGTGCCGAGCGGCGAATGGGGTGACCGTGTCCTGGCCGCCTTCCGCCA < 1:1341392/150‑1GGCGCCGCCACAACTGTTCCAGTTCGGCCTGGCTGCCGAGGACGAAGCCCGCGAAGTGGCCCGCCGCGCCCGCGCCGATGGCATGGTCCGCGCCGTTGCCCTGGTGCCGAGCGGCGAATGGGGTGACCGTGTCCTGGCCGCCTTCCGCCA < 1:919278/150‑1 GCGCCGCCACAACTGTTCCAGTTCGGCCTGGCTGCCGAGGACGAAGCCCGCGAAGTGGCCCGCCGCGCCCGCGCCGATGGCATGGTCCGCGCCGTTGCCCTGGTGCCGAGCGGCGAATGGGGTGACCGTGTCCTGGCCGCCTTCCGCCAG < 1:403921/150‑1 GCCGCCACAACTGTTCCAGTTCGGCCTGGCTGCCGAGGACGAAGCCCGCGAAGTGGCCCGCCGCGCCCGCGCCGATGGCATGGTCCGCGCCGTTGCCCTGGTGCCGAGCGGCGAATGGGGTGACCGTGTCCTGGCCGCCTTCCGCCAGGA < 2:1747717/150‑1 GCCGCCACAACTGTTCCAGTTCGGCCTGGCTGCCGAGGACGAAGCCCGCGAAGTGGCCCGCCGCGCCCGCGCCGATGGCATGGTCCGCGCCGTTGCCCTGGTGCCGAGCGGCGAATGGGGTGACCGTGTCCTGGCCGCCTTCCGCCAGGA < 2:1747675/150‑1 CGAGGACGAAGCCCGCGAAGTGGCCCGCCGCGCCCGCGCCGATGGCATGGTCCGCGCCGTTGCCCTGGTGCCGAGCGGCGAATGGGGTGACCGTGTCCTGGCCGCCTTCCGCCAGGA < 1:1721451/117‑1 CGAGGACGAAGCCCGCGAAGTGGCCCGCCGCGCCCGCGCCGATGGCATGGTCCGCGCCGTTGCCCTGGTGCCGAGCGGCGAATGGGGTGACCGTGTCCTGGCCGCCTTCCGCCAGGA > 2:1721451/1‑117 CGTGTCCTGGCCGCCTTCCGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTTGTGG > 2:794952/1‑150 GTGTCCTGGCCGCCTTCCGCCAGGACACGGTCACCCCATTCGCCGCTCGGCCCCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTTGTGGC > 1:1877245/1‑150 GTGTCCTGGCCGCCTTCCGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATG < 1:134993/75‑1 GTGTCCTGGCCGCCTTCCGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATG > 2:134993/1‑75 TGTCCTGGCCGCCTTCCGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTTGTGGCG > 1:24555/1‑150 TCCTGGCCGCCTTCCGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTTGTGGCGGC > 2:132620/1‑150 CTGGCCGCCTTCCGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGA < 1:379838/65‑1 CTGGCCGCCTTCCGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGA > 2:379838/1‑65 GCCTTCCGCCAGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTTGTGGCGGCGCCTTCTG < 1:794952/150‑1 AGGACACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGTCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTTGTGGCGGCGCCTTCTGGCCAGCGTCG > 2:238001/1‑150 GGCGCCGCCACAACTGTTCCAGTTCGGCCTGGCTGCCGAGGACGAAGCCCGCGAAGTGGCCCGCCGCGCCCGCGCCGATGGCATGGTCCGCGCCGTTGCCCTGGTGCCGAGCGGCGAATGGGGTGACCGTGTCCTGGCCGCCTTCCGCCAGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1510526‑1510373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggacACGGTCACCCCATTCGCCGCTCGGCACCAGGGCAACGGCGCGGACCATGCCATCGGCGCGGGCGCGGCGGGCCACTTCGCGGGCTTCGTCCTCGGCAGCCAGGCCGAACTGGAACAGTTGTGGCGGCGCCTTCTGGCCAGCGTCG > NC_002947/1510397‑1510541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |