New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1615708 = | 73 (0.980) | 7 (0.100) | 5/248 | NT | 9.3% | coding (86/1056 nt) | PP_1415 | membrane protein |
? | NC_002947 | 1615757 = | 65 (0.890) | coding (37/1056 nt) | PP_1415 | membrane protein |
AATGCTCGCCCTGCCGCTGCTGCGCATCTGGCGCAAACGCAGCCTGCAGCGCCGGGCCCTGGCCGATGCCTGATCGGTCGTTGCCATTGTTCGTCGCGACCGGGCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1615858‑1615708 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCATGCTGATCGGGCTCGACCAGA > NC_002947/1615757‑1615904 AATGCTCGCCCTGCCGCTGCTGCGCATCTGGCGCAAACGCAGCCTGCAGCGCCGGGCCCTGGCCGATGCCTGATCGGTCGTTGCCATTGTTCGTCGCGACCGGGCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGC < 1:694956/150‑1 TCGCGACCGGGCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAG > 2:358924/1‑150 CGGGCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGC > 2:784468/1‑150 GCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCG > 1:1290749/1‑87 GCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCG < 2:1290749/87‑1 CTTGCTGGCGGTTTTGCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGC < 1:1760472/133‑1 CTTGCTGGCGGTTTTGCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGC > 2:1760472/1‑133 CTGGCGGTTTTGCCGCCAGCAAGGTCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGC > 2:1908128/1‑150 GCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTAC > 1:1286641/1‑113 GCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTAC < 2:1286641/113‑1 GCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGGTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCATGCTGATCGGGCGCGACCAG > 2:1088417/1‑150 CCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCATGCTGATCGGGCTCGACCAGA > 2:1384663/1‑150 CCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCATGCTGATCGGGCTCGACCAGA < 2:1899277/150‑1 AATGCTCGCCCTGCCGCTGCTGCGCATCTGGCGCAAACGCAGCCTGCAGCGCCGGGCCCTGGCCGATGCCTGATCGGTCGTTGCCATTGTTCGTCGCGACCGGGCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1615858‑1615708 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCATGCTGATCGGGCTCGACCAGA > NC_002947/1615757‑1615904 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |