New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1615708 =73 (0.980)7 (0.100) 5/248 NT 9.3% coding (86/1056 nt) PP_1415 membrane protein
?NC_002947 1615757 = 65 (0.890)coding (37/1056 nt) PP_1415 membrane protein

AATGCTCGCCCTGCCGCTGCTGCGCATCTGGCGCAAACGCAGCCTGCAGCGCCGGGCCCTGGCCGATGCCTGATCGGTCGTTGCCATTGTTCGTCGCGACCGGGCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1615858‑1615708
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCATGCTGATCGGGCTCGACCAGA  >  NC_002947/1615757‑1615904
                                                                                                                                                                                                                                                                                                           
AATGCTCGCCCTGCCGCTGCTGCGCATCTGGCGCAAACGCAGCCTGCAGCGCCGGGCCCTGGCCGATGCCTGATCGGTCGTTGCCATTGTTCGTCGCGACCGGGCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGC                                                                                                                                                       <  1:694956/150‑1
                                                                                             TCGCGACCGGGCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAG                                                          >  2:358924/1‑150
                                                                                                    CGGGCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGC                                                   >  2:784468/1‑150
                                                                                                       GCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCG                                                                                                               >  1:1290749/1‑87
                                                                                                       GCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCG                                                                                                               <  2:1290749/87‑1
                                                                                                                 CTTGCTGGCGGTTTTGCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGC                                                       <  1:1760472/133‑1
                                                                                                                 CTTGCTGGCGGTTTTGCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGC                                                       >  2:1760472/1‑133
                                                                                                                     CTGGCGGTTTTGCCGCCAGCAAGGTCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGC                                  >  2:1908128/1‑150
                                                                                                                                                    GCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTAC                                        >  1:1286641/1‑113
                                                                                                                                                    GCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTAC                                        <  2:1286641/113‑1
                                                                                                                                                    GCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGGTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCATGCTGATCGGGCGCGACCAG   >  2:1088417/1‑150
                                                                                                                                                     CCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCATGCTGATCGGGCTCGACCAGA  >  2:1384663/1‑150
                                                                                                                                                     CCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCATGCTGATCGGGCTCGACCAGA  <  2:1899277/150‑1
                                                                                                                                                                                                                                                                                                           
AATGCTCGCCCTGCCGCTGCTGCGCATCTGGCGCAAACGCAGCCTGCAGCGCCGGGCCCTGGCCGATGCCTGATCGGTCGTTGCCATTGTTCGTCGCGACCGGGCTGGTCGGCCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1615858‑1615708
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCATGCTGATCGGGCTCGACCAGA  >  NC_002947/1615757‑1615904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.