| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1666839 | 77 (1.030) | 6 (0.090) | 4/222 | NT | 8.3% | intergenic (‑69/‑202) | PP_1460/ffh | membrane protein/signal recognition particle GTPase subunit |
| ? | NC_002947 | = 1666868 | 65 (1.000) | intergenic (‑98/‑173) | PP_1460/ffh | membrane protein/signal recognition particle GTPase subunit | |||||
TATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1666677‑1666839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaggATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTCC < NC_002947/1666868‑1666720 TATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGC < 1:415537/150‑1 ATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGCACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGAGTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCG > 1:1504368/1‑150 TAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGC > 1:858218/1‑150 TAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGC < 1:685710/150‑1 GGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTC > 1:1703007/1‑150 CGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATATATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCA < 1:1731337/150‑1 GGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCAC > 1:1418439/1‑150 ACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATGGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTG < 2:185022/150‑1 ACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCGCGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTG < 1:532226/150‑1 CATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTAATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCACACAGGATCCTCACTACCTGCAGGCCTGCGACATACCTGTGG < 2:888524/150‑1 ATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGG < 2:1847172/150‑1 CGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTG > 1:638335/1‑133 CGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTG < 2:638335/133‑1 GCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAG < 1:455786/150‑1 CCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTTTTCCTTGATCCGCGGAATCTATGCCAAACTACGTCTCTTTAAAGGCTCGCCAACCAGGA < 2:1809289/150‑1 CCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGA > 2:858218/1‑150 CCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGA > 2:1603681/1‑150 CCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCA < 2:1152857/88‑1 CCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCA > 1:1152857/1‑88 CTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTT < 2:255031/150‑1 CTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTT < 2:642253/150‑1 CCCACAGGATCCTCGCTACCTGCAAGACTGCTCTATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACNTAT < 2:1186791/150‑1 CCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATG > 2:2624/1‑150 CACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGT > 1:1335880/1‑150 GGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTC < 2:736277/150‑1 GGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGAGGGTGTCTGTAGAAATTCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTC < 2:1483460/150‑1 GATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTCC > 1:739615/1‑150 GATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTC < 2:1685655/82‑1 GATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTC > 1:1685655/1‑82 TATATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1666677‑1666839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaggATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTCC < NC_002947/1666868‑1666720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |