New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1748731 =	60 (0.800)	6 (0.080)	6/242	NT	9.8%	intergenic (‑22/‑310)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
	?	NC_002947	1748774 =	53 (0.750)					intergenic (‑65/‑267)	PP_1548/PP_5744	hypothetical protein/hypothetical protein

TGAGCCACCAGGCGCCGAGTTAATCCGGCGATTGAGTTCTGGTGGACGTTACGCAACGTAGCAAGCTTCCTCGCTCGACATGTCGGCCCGCAGGCTTGCTGAGCAACACCGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGAC‑GG‑GAAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1748883‑1748731 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGC  >  NC_002947/1748774‑1748921                                                                                                                                                                                                                                                                                                                 TGAGCCACCAGGCGCCGAGTTAATCCGGCGATTGAGTTCTGGTGGACGTTACGCAACGTAGCAAGCTTCCTCGCTCGACATGTCGGCCCGCAGGCTTGCTGAGCAACACCGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGAC‑GG‑GAA                                                                                                                                                         >  1:1167856/1‑150  GAGCCACCAGGCGCCGAGTTAATCCGGCGATTGAGTTCTGGTGGACGTTACGCAACGTAGCAAGCTTCCTCGCTCGACATGTCGGCCCGCAGGCTTGCTGAGCAACACCGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGAC‑GG‑GAAA                                                                                                                                                        <  1:796149/150‑1                                                                                                          ACACCGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGACAGT‑GAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGC                                                                                            >  1:1153547/1‑107                                                                                                          ACACCGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGACAGT‑GAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGC                                                                                            <  2:1153547/107‑1                                                                                                            ACCGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGAC‑GG‑GAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGT                                              >  2:1458847/1‑150                                                                                                              CGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGAC‑GG‑GAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATC                                                                     <  1:1328100/125‑1                                                                                                              CGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGAC‑GG‑GAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATC                                                                     >  2:1328100/1‑125                                                                                                                       TGGCTGGCCTTGGCAACAGGGCCAGAC‑AGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTG                                    >  1:1028332/1‑150                                                                                                                                                       AAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGC     <  1:884228/150‑1                                                                                                                                                        AATCGGTGTTGCTCAGCAAGCGTGAGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGGAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTGTTTAAATAGCGGTGGCTGCCGGAGCT    <  2:961631/150‑1                                                                                                                                                        AATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGCTCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCT    <  1:959786/150‑1                                                                                                                                                        AATCGGTGTTGCGCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCT    <  2:38137/150‑1                                                                                                                                                          TCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAAGCGCCGGATTAACTCGGCGTCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGC  <  2:687257/150‑1                                                                                                                                                                                                                                                                                                                 TGAGCCACCAGGCGCCGAGTTAATCCGGCGATTGAGTTCTGGTGGACGTTACGCAACGTAGCAAGCTTCCTCGCTCGACATGTCGGCCCGCAGGCTTGCTGAGCAACACCGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGAC‑GG‑GAAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1748883‑1748731 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGC  >  NC_002947/1748774‑1748921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.