New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1774997	54 (0.720)	4 (0.060)	4/240	NT	6.9%	coding (135/1077 nt)	PP_1582	hypothetical protein
	?	NC_002947	= 1775002	57 (0.810)					coding (140/1077 nt)	PP_1582	hypothetical protein

CCATAAGGAACACAAGCATGCGCGTATCGAGCTACAACCATAAGGTGGCGCCGTTTTTCCCTCATCAATACAAGTTGAAAAAGGCTATTGAGGCTTTTTCCGGAACGAAAACGAACACCTATGTAGCCGGGCCATCCGTTGCGGTGGCGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1774846‑1774997 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgaacTTGTCGTTCGCCACCGCAACGGATGGCCCGGCTACATAGGTGTTCGTTTTCGTTCCGGAAAAAGCCTCAATAGCCTTTTTCAACTTGTATTGATGAGGGAAAAACGGCGCCACCTTATGGTTGTAGCTCGATACGCGCATGCTTGTG  <  NC_002947/1775002‑1774856                                                                                                                                                                                                                                                                                                             CCATAAGGAACACAAGCATGCGCGTATCGAGCTACAACCATAAGGTGGCGCCGTTTTTCCCTCATCAATACAAGTTGAAAAAGGCTATTGAGGCTTTTTCCGGAACGAAAACGAACACCTATGTAGCCGGGCCATCCGTTGCGGTGGCGA                                                                                                                                                       >  1:11697/1‑150                                                                                                  TTCCGGAACGAAAACGAACACCTATGTAGCCGGGCCATCCGTTGCGGTGGCGAACTTGTCGTTCGCCACC                                                                                                                                      >  1:1259764/1‑70                                                                                                  TTCCGGAACGAAAACGAACACCTATGTAGCCGGGCCATCCGTTGCGGTGGCGAACTTGTCGTTCGCCACC                                                                                                                                      <  2:1259764/70‑1                                                                                                                                         CGTTGCGGTGGCGAACGACAAGTTCGCCACCGCAACGGATGGCCCGGCTACATAGGTGTTCGTTTTCGTTCCGGAAAAAGCCTCAATAGCCTTTTTCAACTT                                                               >  1:800900/1‑102                                                                                                                                         CGTTGCGGTGGCGAACGACAAGTTCGCCACCGCAACGGATGGCCCGGCTACATAGGTGTTCGTTTTCGTTCCGGAAAAAGCCTCAATAGCCTTTTTCAACTT                                                               <  2:800900/102‑1                                                                                                                                                  GGCGAACTTGTCGTTCGCCACCGCAACGGATGGCCCGGCTACATAGGTGTTCGTTTTCGTTCCGGAAAAAGCCTCAATAGCCTTTTTCAACTTGTATTGATGAGGGAAAAACGGCGCCACCTTATGGTTGTAGCTCGATACGCGCATGCT      >  1:1431492/1‑150                                                                                                                                                     GAACTTGTCGTTCGCCACCGCAACGGATGGCCCGGCTACATAGGTGTTCGTTTTCGTTCCGGAAAAAGCCTCAATAGCCTTTTTCAACTTGTATTGATGAGGGAAAAACGGCGCCACCTTATGGTTGTAGCTCGATACGCGCATGCTTGT   <  1:824143/150‑1                                                                                                                                                     GAACTTGTCGTTCGCCACCGCAACGGATGGCCCGGCTACATAGGTGTTCGTTTTCGTTCCGGAAAAAGCCTCAATAGCCTTTTTCAACTTGTATTGATGAGGGAAAAACGGCGCCACCTTATGGTTGTAGCTCGATACGCGCATGCTTGT   >  2:765458/1‑150                                                                                                                                                      AACTTGTCGTTCGCCACCGCAACGGATGGCCCGGCTACATAGGTGTTCGTTTTCGTTCCGGAAAAAGCCTCAATAGCCTTTTTCAACTTGTATTGATGAGGGAAAAACGGCGCCACCTTATGGTTGTAGCTCGATACGCGCATGCTTGTG  <  1:1800685/150‑1                                                                                                                                                                                                                                                                                                             CCATAAGGAACACAAGCATGCGCGTATCGAGCTACAACCATAAGGTGGCGCCGTTTTTCCCTCATCAATACAAGTTGAAAAAGGCTATTGAGGCTTTTTCCGGAACGAAAACGAACACCTATGTAGCCGGGCCATCCGTTGCGGTGGCGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1774846‑1774997 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgaacTTGTCGTTCGCCACCGCAACGGATGGCCCGGCTACATAGGTGTTCGTTTTCGTTCCGGAAAAAGCCTCAATAGCCTTTTTCAACTTGTATTGATGAGGGAAAAACGGCGCCACCTTATGGTTGTAGCTCGATACGCGCATGCTTGTG  <  NC_002947/1775002‑1774856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.