| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1838113 = | 85 (1.140) | 12 (0.170) | 10/234 | NT | 13.5% | intergenic (+18/+86) | PP_1642/PP_1643 | hypothetical protein/membrane protein |
| ? | NC_002947 | 1838195 = | 75 (1.090) | intergenic (+100/+4) | PP_1642/PP_1643 | hypothetical protein/membrane protein | |||||
TTCATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1838270‑1838113‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaaAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCAC > NC_002947/1838195‑1838339 TTCATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCTGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATG > 2:97123/1‑150 CATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCC < 2:454840/150‑1 ATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCC > 1:1218989/1‑150 ATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCC > 1:1675438/1‑150 GCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGA > 1:1569209/1‑150 ACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAAC > 1:1874623/1‑150 CGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGC < 2:1854396/133‑1 CGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGC < 2:1854494/133‑1 CGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGC > 1:1854494/1‑133 CGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGC > 1:1854396/1‑133 GCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCC < 2:1874623/150‑1 TCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGA < 1:669009/140‑1 TCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGA > 2:669009/1‑140 CACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAA > 1:743609/1‑105 CACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAA < 2:743609/105‑1 AGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAA < 2:1569209/150‑1 GCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCA < 1:385374/150‑1 CCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGC > 2:1149215/1‑150 CGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAAGACCGCCCGCGCCGGGTCGAACGCCGCCAGCA > 2:1589019/1‑150 GCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCAC > 2:512840/1‑150 TTCATTGCCGGGCTACTGTACGTGCGCTGGAAGTTCCAGCATGAGCGGCGCATGGCGGGCGAAGGCAGTTAGATTTTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1838270‑1838113‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaaAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCAC > NC_002947/1838195‑1838339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |