| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2054349 = | 77 (1.030) | 4 (0.050) | 4/250 | NT | 5.2% | coding (320/960 nt) | PP_1829 | alpha/beta family hydrolase |
| ? | NC_002947 | 2054378 = | 70 (0.950) | coding (291/960 nt) | PP_1829 | alpha/beta family hydrolase | |||||
GTCTGGCCCTGCTGCTGGCCAACGAACACATTGCCAGCGTGCGTTACGACAAACGCGGGGTGGCCGCCAGCCAGCCGGCCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2054433‑2054349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGAGCCGGCGATGATCAGCACCACTGGCGGCGGG > NC_002947/2054378‑2054525 GTCTGGCCCTGCTGCTGGCCAACGAACACATTGCCAGCGTGCGTTACGACAAACGCGGCGTGGCCGGCTGGCTGGCGGCCACCCCGCGTTTGTCGTAA > 1:1798909/1‑98GTCTGGCCCTGCTGCTGGCCAACGAACACATTGCCAGCGTGCGTTACGACAAACGCGGCGTGGCCGGCTGGCTGGCGGCCACCCCGCGTTTGTCGTAA < 2:1798909/98‑1 GGGTGGCCGCCAGCCAGCCGGCCACGCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTC > 1:269668/1‑61 GGGTGGCCGCCAGCCAGCCGGCCACGCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTC < 2:269668/61‑1 CCGCGTTTGTCGTAACGCACGCTGGCAATGTGTCCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGCCCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGAGCCGGCGATGATCAGCACCACTGGCGGCGGG < 1:10294/150‑1 GTCTGGCCCTGCTGCTGGCCAACGAACACATTGCCAGCGTGCGTTACGACAAACGCGGGGTGGCCGCCAGCCAGCCGGCCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2054433‑2054349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGAGCCGGCGATGATCAGCACCACTGGCGGCGGG > NC_002947/2054378‑2054525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |