| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2087064 | NA (NA) | 8 (0.110) | 6/244 | NT | NA | coding (1136/1302 nt) | PP_1865 | transposase |
| ? | NC_002947 | = 2087083 | NA (NA) | coding (1155/1302 nt) | PP_1865 | transposase | |||||
AGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086911‑2087064‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggc‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC < NC_002947/2087083‑2086935 AGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCTTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACC > 1:781329/1‑150AGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACC < 1:1012564/150‑1AGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGGGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACC > 2:661251/1‑150 GCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGGCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATACGAGTACATGCCCGTTGTTCCGATGGAAAACCT > 2:282630/1‑150 GCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGGGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCT > 1:1368901/1‑150 GCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGATAGACCAGCTTCCAGATTGGCCTCGCAGCCGAGGACATGCCCGTTGTTCCGGTGGAAAACCT > 2:912666/1‑150 CGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTG < 1:591225/150‑1 GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG < 1:1372528/150‑1 GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG > 1:1608339/1‑150 GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG > 1:892368/1‑150 GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCACCGGGCCGATGGAAAACCTGG < 1:152856/150‑1 GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAAGTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG < 1:687502/150‑1 AAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC > 2:553537/1‑150 AAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC > 1:1795470/1‑150 AAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC > 1:1285171/1‑150 AAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATCCGGGTTGGCCTGCCACCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC > 1:1058500/1‑150 AAGTGTTGAACAGGCTCACCGCGATGCCTTGCCAGAGAATTGGGAAGACTCGATCTATCACTTGGAGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC > 1:395412/1‑150 AAGTGTTGAACAGGCTCACCGCGACGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC < 2:1240320/150‑1 CGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTG‑‑‑‑‑GCTCCAGCAGGCGCTGAGCCA < 1:679087/150‑1 ATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCA < 1:1175419/150‑1 ATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCA < 2:1784290/150‑1 CTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTG > 1:453258/1‑121 CTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTG < 2:453258/121‑1 GAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG < 1:1132944/115‑1 GAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG > 2:1132944/1‑115 GGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCTCCAGCAGGCGCTGA < 2:726674/129‑1 GGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCTCCAGCAGGCGCTGA > 1:726674/1‑129 TCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG > 2:88329/1‑75 TCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG < 1:88329/75‑1 AGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCC > 1:1106471/1‑96 AGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCC < 2:1106471/96‑1 ATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCCTGCTGGAGCTG‑GCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAG > 1:1887471/1‑150 AAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAA > 1:1346352/1‑150 TGGC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCAT > 2:100260/1‑150 TGGC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAA > 2:1788309/1‑145 TGGC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAA < 1:1788309/145‑1 TGGC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACG > 1:1319438/1‑47 TGGC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACG < 2:1319438/47‑1 aC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCC > 2:546262/2‑91 aC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCC < 1:546262/90‑1 GC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCG > 1:1404990/1‑150 GC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCG > 1:1855777/1‑150 GC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTC > 2:586293/1‑94 GC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTC < 1:586293/94‑1 C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC > 1:1685622/1‑150 C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTG > 1:533982/1‑100 C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTG < 2:533982/100‑1 C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGAT > 2:548709/1‑97 C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGAT < 1:548709/97‑1 C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCAT > 1:1448821/1‑76 C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCAT < 2:1448821/76‑1 AGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086911‑2087064‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggc‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC < NC_002947/2087083‑2086935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |