| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2115091 = | 56 (0.750) | 3 (0.040) | 3/236 | NT | 5.5% | coding (568/1806 nt) | PP_1883 | hypothetical protein |
| ? | NC_002947 | 2115131 = | 52 (0.750) | coding (608/1806 nt) | PP_1883 | hypothetical protein | |||||
TCGGCGAATTCGATGCGATAGTGCAAAAAGGCGAAGCCGCCGAGATACATGAAGACCTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2115185‑2115091‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccaggTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGTTTCGCCCGCCGCCGGCGACCCACCGCCGGCACCTTTGCTGGCGGCGCCACGT > NC_002947/2115131‑2115279 TCGGCGAATTCGATGCGATAGTGCAAAAAGGCGAAGCCGCCGAGATACATGAAGACCTGGCCGATATCCAGGTGCCACAGCGGTGGT > 1:1618078/1‑87TCGGCGAATTCGATGCGATAGTGCAAAAAGGCGAAGCCGCCGAGATACATGAAGACCTGGCCGATATCCAGGTGCCACAGCGGTGGT < 2:1618078/87‑1 CTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGTTTCGCCCGCCGCCG > 2:477757/1‑150 TATCCAGGTGCCACAGCAGTGGTCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTC < 1:1794079/104‑1 TATCCAGGTGCCACAGCAGTGGTCGGCCAGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTC > 2:1794079/1‑104 AGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGTTTCGCCCGCCGCCGGCGACCCACCGCCGGCACCTTTGCTGGCGGCGCCAC < 1:1652025/150‑1 AGGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGTTTCGCCCGCCGCCGGCGACCCACCGCCGGCACCTTTGCTGGCGGCGCCAC < 1:758734/150‑1 GGTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATAGTTTCGCCCGCCGCCGGAGACCCACCGCCGGCACCTTTCCTGGCGGCGCCACG > 1:1006940/1‑150 GTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATAATTTACCCTGCTTCGTCCTACCCACCGCCTGCACCTTTGCTGGCGGCGCCACGT > 2:1452766/1‑150 TCGGCGAATTCGATGCGATAGTGCAAAAAGGCGAAGCCGCCGAGATACATGAAGACCTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2115185‑2115091‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccaggTCTTCATGTATCTCGGCGGCTTCGCCTTTTTGCACTATCGCATCGAATTCGCCGATGGCACCAGCAGCCGGTCGCCAGTGCAGCGCTTCGACATCGTTTCGCCCGCCGCCGGCGACCCACCGCCGGCACCTTTGCTGGCGGCGCCACGT > NC_002947/2115131‑2115279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |