| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2434120 = | 65 (0.870) | 4 (0.060) | 4/228 | NT | 6.4% | intergenic (+20/+88) | uup/PP_2132 | ABC transporter ATP‑binding protein/universal stress protein |
| ? | NC_002947 | 2434194 = | 59 (0.880) | intergenic (+94/+14) | uup/PP_2132 | ABC transporter ATP‑binding protein/universal stress protein | |||||
GCTCCACGGCCAACGATGTGCTGCACGGTGCGCCGTGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2434281‑2434120‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaagaggcGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCGACAACGATCAGGTCGCACTTCTG > NC_002947/2434194‑2434342 GCTCCACGGCCAACGATGTGCTGCACGGTGCGCCGTGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTAC < 2:1771353/150‑1 TCCACGGCCAACGATGTGCTGCACGGTGCGCCGTGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCC < 1:1920912/150‑1 ACGGCCAACGATGTGCTGCACGGTGCGCCGTGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCG > 1:1722748/1‑150 CCAACGATGTGCTGCACGGTGCGCCGTGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGA > 2:1871807/1‑150 CAACGATGTGCTGCACGGTGCGCCGTGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCCGGTGCGGCTTTACCCGCGAAGAG > 2:98832/1‑150 TGCGCCGTGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAG > 2:1409025/1‑132 TGCGCCGTGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAG < 1:1409025/132‑1 TGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAG > 2:380705/1‑125 TGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAG < 1:380705/125‑1 GATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAGG < 2:247371/93‑1 GATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAGG > 1:247371/1‑93 GACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGC < 2:363332/82‑1 GACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGC > 1:363332/1‑82 CCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAGGCGGGTTCTGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCAC < 1:1811541/124‑1 CCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAGGCGGGTTCTGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCAC > 2:1811541/1‑124 GCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAG > 1:829993/1‑87 GCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAG < 2:829993/87‑1 CCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCGGAAGAACTTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCGACAACGATCAGG > 1:1553580/1‑150 CCGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGCACCTAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCGACAACGATCAGG > 1:1552640/1‑150 CGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAAT > 2:918030/1‑110 CGCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAAT < 1:918030/110‑1 GCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCGACAACGATCAGGTC > 1:1458702/1‑150 GCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCC > 2:370656/1‑135 GCGAAGAGGCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCC < 1:370656/135‑1 GCGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCGACAACGATCAGGTCGCACTTCT > 1:1797540/1‑150 CGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCGACAACGATCAGGTCGCACTTCTG < 2:1047544/150‑1 GCTCCACGGCCAACGATGTGCTGCACGGTGCGCCGTGTGACGTGCTGGCGGTACGCTTGCTGAAGAAGGATTGACTGGACCTGAACCCGCCTCTTCGCGGGCCAGCCCGCGCCTGCAAGGGTATGGCAATCCCTGCAGGTGCGGCTTTACCCGCGAAGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2434281‑2434120‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaagaggcGGGTTCAGGTCCAGTCAATCCTTCTTCAGCAAGCGTACCGCCAGCACGTCACACGGCGCACCGTGCAGCACATCGTTGGCCGTGGAGCCCAGCAGCAATGCCAGGCCGTGACGGCCATGGCTGCCGACAACGATCAGGTCGCACTTCTG > NC_002947/2434194‑2434342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |