| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2474183 | 22 (0.290) | 9 (0.150) | 10/208 | NT | 27.7% | intergenic (‑45/+135) | PP_2167/tal | PhoD‑like phosphatase/transaldolase |
| ? | NC_002947 | = 2474205 | 29 (0.470) | intergenic (‑67/+113) | PP_2167/tal | PhoD‑like phosphatase/transaldolase | |||||
AGGCGAACGCGGGCTGCAGCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2474021‑2474183‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgttcgcgggcaagcccgcTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCGCCATAGCCACCCGAGCTGTCGATGACCTCCCCTAACCCGTTGCCCCTCGTTCTCGCCGGCCCGGTACTGCGCCGCCTGGAACCCCAGCGTCTGGCCGTCTGGC < NC_002947/2474205‑2474057 AGGCGAACGCGGGCTGCAGCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG > 1:459029/1‑150 GCGAACGCGGGCTGCAGCGGTTGGGTAGTGACGAGCCAGACGGCCATACGCTGGGGTTCCAGGCGGCGCAGTATAGAAAAGGCGAGAACCATGTGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCG < 1:1672153/150‑1 CGAACGCGGGCTGCAGCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGG < 1:1516539/150‑1 CGGGCTGCAGCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGC < 1:315137/150‑1 GGCTGCAGCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCC < 1:532643/150‑1 GGCTGCAGCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGCGGCTATGGCGGCCTGTTCGCGGGCAAGCCC > 2:1128424/1‑150 GCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGG > 1:398919/1‑150 CCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC < 2:398919/150‑1 CCAGACGCTGGGGTTCCCGGCTGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC < 1:1435421/142‑1 CCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC > 2:1435421/1‑142 caGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGG < 1:425512/70‑1 CGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGG > 2:425512/1‑72 CGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTT > 2:429238/1‑109 TCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGG < 1:1892865/65‑1 TCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGG > 2:1892865/1‑65 TATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAA > 2:797178/1‑49 TATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAA < 1:797178/49‑1 TGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCGCCATAGCCGCCCGAGCTGTCGATGACCTCCCCTAACCCGTTGCCCCTCGTTCTCGCCGGCCCGGTACTGCGCCGCCTGGAACCCC > 1:1128424/1‑150 TCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCGCCATAGCCACCCGAGCTGTCGATGACCTCCCCTAACCCGTTGCCCCTCGTTCTCGCCGGCCCGGTACTGCGCCGCCTGGAACCCCAGC < 2:508276/150‑1 CGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCGCCATAGCCACCCGAGCTGTCGATGACCTCCCCTAACCCGTTGCCCCTCGTTCTCGCCGGCCCGGTACTGCGCCGCCTGGAACCCCAGCGTC > 2:268590/1‑150 AAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCGCCATAGCCACCCGAGCTGTCGATGACCTCCCCTAACCCGTTGCCCCTCGTTCTCGCCGGCCCGGTACTGCGCCGCCTGGAACCCCAGCGTCTGGCC > 1:674393/1‑150 AAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCGCCATAGCCACCCGAGCTGTCGATGACCTCCCCTAACCCGTTGCCCCTCGTTCTCG > 1:429238/1‑109 CTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACGGGCCGCCATAGCCACCCGAGCTGTCGATGCCCTCCCCTAACCCGTTGCCCCTCGTTCTCGCCGGCCCGGTACTGCGCCGCCTGGAACCCCAGCGTCTGGCCGTCTGGC < 1:1063954/150‑1 AGGCGAACGCGGGCTGCAGCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2474021‑2474183‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgttcgcgggcaagcccgcTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCGCCATAGCCACCCGAGCTGTCGATGACCTCCCCTAACCCGTTGCCCCTCGTTCTCGCCGGCCCGGTACTGCGCCGCCTGGAACCCCAGCGTCTGGCCGTCTGGC < NC_002947/2474205‑2474057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |