| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2744365 = | 72 (0.970) | 8 (0.120) | 6/232 | NT | 11.4% | coding (687/834 nt) | PP_2398 | hypothetical protein |
| ? | NC_002947 | 2744403 = | 59 (0.870) | coding (725/834 nt) | PP_2398 | hypothetical protein | |||||
GCACGCAGGGTCTCATTCATCTGCTTGCCCTCCGGCAGCGCATTGCACGGCACGCATACGCGCCGTCTCGGCCAACAGTTCGGCCAAGGGCGGATAGTTGAAATCACGTTCAAGCACCGTCGGCTGTACGCCAAAGCGCGCACAAGCGCTGGCGTACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2744524‑2744365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgtacagcCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGGCCCGTCACCT > NC_002947/2744403‑2744551 GCACGCAGGGTCTCATTCATCTGCTTGCCCTCCGGCAGCGCATTGCACGGCACGCATACGCGCCGTCTCGGCCAACAGCTCGGCCAAGGGCGGATAGTTGAAATCACGTTCAAGCACCGTCGGCTGTACGCCAAAGCGCGCACAAGCGCT < 1:449293/150‑1 ACGCAGGGTCTCATTCATCTGCTTGCCCTCCGGCAGCGCATTGCACGGCACGCATACGCGCCGTCTCGGCCAACAGTTCGGCCAAGGGCGTATAGTTGAAATCACGTTCAAGCACCGTCGGCTGTACGCCAAAGCGCGCACAAGCGCTGG < 2:161916/150‑1 GGGTCTCATTCATCTGCTTGCCCTCCGGCAGCGCATTGCACGGCACGCATACGCGCCGTCTCGGCCAACAGTTCGGCCAAGGGCGGATAGTTGAAATCACGTTCAAGCACCGTCGGCTGTACGCCAAAGCGCGCACAAGCGCTGGCGTAC > 2:1672211/1‑150 GGTCTCATTCATCTGCTTGCCCTCCGGCAGCGCATTGCACGGCACGCATACGCGCCGTCTCGGCCAACAGTTCGGCCAAGGGCGGATAGTTGAAATCACGTTCAAGCACCGTCGGCTGTACGCCAGAGCGCGCACAAGCGCTGGCGTACA < 2:1285664/150‑1 GGTCTCATTCATCTGCTTGCCCTCCGGCAGCGCATTGCACGGCACGCATACGCGCCGTCTCGGCCAACAGTTCGGCCAAGGGCGGATAGTTGAAATCACGTTCAAGCACCGTCGGCTGTACGCCAAAGCGCGCACAAGCGCTGGCGTACA < 1:1116742/150‑1 ACCGTCGGCTGTACGCCAAAGCGCGCACAAGCGCTGGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGC < 2:230418/128‑1 ACCGTCGGCTGTACGCCAAAGCGCGCACAAGCGCTGGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCCCCCTTGTCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGC > 1:230418/1‑128 TGTACGCCAAAGCGCGCACAAGCGCTGGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACC > 1:886039/1‑150 TGTACGCCAAAGCGCGCACAAGCGCTGGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAAT > 1:1921191/1‑117 TGTACGCCAAAGCGCGCACAAGCGCTGGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAAT < 2:1921191/117‑1 TACGCCAAAGCGCGCACAAGCGCTGGCGTACAGCCGCCGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCT > 2:465294/1‑150 TACGCCAAAGCGCGCACAAGCGCTGGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCT > 2:1902645/1‑150 CAAAGCGCGCACAAGCGCTGGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTG > 2:1671112/1‑150 TGGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGG < 2:1236691/150‑1 TGGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGG < 2:1909192/150‑1 GGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGGC < 1:218106/150‑1 GGCGTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGGC < 2:28571/150‑1 CGTATAGCCGAGGTTGCTTGAATTTTATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGGCCC < 2:1543074/150‑1 GTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGGCCC > 1:750234/1‑149 GTACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGGCCC < 2:750234/149‑1 TACAGCCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGGCCCGT < 2:1368981/150‑1 CCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGGCCCGTCACCT > 2:196803/1‑150 GCACGCAGGGTCTCATTCATCTGCTTGCCCTCCGGCAGCGCATTGCACGGCACGCATACGCGCCGTCTCGGCCAACAGTTCGGCCAAGGGCGGATAGTTGAAATCACGTTCAAGCACCGTCGGCTGTACGCCAAAGCGCGCACAAGCGCTGGCGTACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2744524‑2744365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgtacagcCGACGGTGCTTGAACGTGATTTCAACTATCCGCCCTTGGCCGAACTGTTGGCCGAGACGGCGCGTATGCGTGCCGTGCAATGCGCTGCCGGAGGGCAAGCAGATGAATGAGACCCTGCGTGCGCAGCAGTATGCCTTGGCCCGTCACCT > NC_002947/2744403‑2744551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |