| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2801748 | 84 (1.130) | 9 (0.120) | 9/246 | NT | 10.1% | coding (89/1575 nt) | rbsA‑I | ribose ABC transporter ‑ ATP‑binding subunit |
| ? | NC_002947 | = 2801807 | 79 (1.090) | coding (148/1575 nt) | rbsA‑I | ribose ABC transporter ‑ ATP‑binding subunit | |||||
AGCCTGATGTGGATGCCGACAACGTCATCCAGACCCCGGTCGAACTCATCACCAAGAAGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGC‑CCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2801596‑2801748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGGCTGGGCATAGGTCTTGCCCAGGCCGCTGGCGGCAAGCACCACTTCATTGGCCAATGCAGGCATGGCCGATTCTCCTGGCAGCA < NC_002947/2801807‑2801661 AGCCTGATGTGGATGCCGACAACGTCATCCAGACCCCGGTCGAACTCATCACCAAGAAGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGC‑C < 2:1303610/150‑1 GCCGACAACGTCATCCAGACCCCGGTCGAACTCATCACCAAGAAGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCTGCG‑CCGTTCTCGCCGGTC > 2:1551876/1‑150 GACAACGTCATCCAGACCCCGGTCGAACTCATCACCAAGAAGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGC‑CCGTTCTCGCCGGTCAGG > 1:358625/1‑150 CCGGTCGAACTCATCACCAAGAAGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCGGCCAGCGGCCTGGGCAAGACCTATGCCCAGC‑CCGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCG > 2:1036749/1‑150 TCACCAAGACGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGC‑CCGTACTCGGCG‑‑‑A‑GGTCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGAC < 1:419295/150‑1 AAGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGC‑CCGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCG < 1:1036749/150‑1 CTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGAAAGACCTATGCCCAGC‑CCGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGG < 2:358625/150‑1 ATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGGCATGGCAAGACCTATG‑CCTGCGCCGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGGCTGGGCATAGG < 1:1551876/150‑1 TGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGC‑CCGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCAGAGTACGGGCTGGGCATAGGT > 1:941377/1‑119 TGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGC‑CCGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCAGAGTACGGGCTGGGCATAGGT < 2:941377/119‑1 CGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGGCTGGGCATAGGTCTTGCCCAGGCCGCTGGCGGCAAGCACCACTTCATTGGCCAATGCAGGCATGGCCGATTCTCCTGGCAGCA < 1:627316/150‑1 AGCCTGATGTGGATGCCGACAACGTCATCCAGACCCCGGTCGAACTCATCACCAAGAAGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGC‑CCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2801596‑2801748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGGCTGGGCATAGGTCTTGCCCAGGCCGCTGGCGGCAAGCACCACTTCATTGGCCAATGCAGGCATGGCCGATTCTCCTGGCAGCA < NC_002947/2801807‑2801661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |