| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2914142 = | 92 (1.230) | 9 (0.130) | 6/242 | NT | 10.4% | coding (3119/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
| ? | NC_002947 | 2914170 = | 67 (0.940) | coding (3147/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin | |||||
CCAGTCGAAACCGGACATGCCATCCATTTTGTCTTGGGCATCGCTGCCGACGAAGATATCGTCGCCGCCCTCACCGATCATTTCGTCGAAGCCGCCGCCCCCGACGAAGATGTCGTTGCCAATGACTTCGTCACCCAGCAAGGGTGCGAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2914293‑2914142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaagtCATTGGCAACGACATCTTCGTCGGGGGCGGCGGCTTCGACGAAATGATCGGTGAGGGCGGCGACGATATCTTCGTCGGCAGCGATGCCCAAGACAAAATGGATGGCATGTCCGGTTTCGACTGGGTCACCAACAAGAATGATCGCGTCG > NC_002947/2914170‑2914318 CCAGTCGTAACCGGACATGCCATCCATTTTGTCTTGGGCATCGCTGCCGACGAAGATATCGTCGCCGCCCTCACCGATCATTTCGTCGAAGCCGCCGCCCCCGACGAAGATGTCGTTGCCAATGACTTCGTCACCCAGCAAGGGTGCGAA < 1:840552/150‑1CCAGTCGAAACCGGACATGCCATCCATTTTGTCTTGGGCATCGCTGCCGACGAAGATATCGTCGCCGCCCTCACCGATCATTTCGTCGAAGCCGCCGCCCCCGACGAAGATGTCGTTGCCAATGACTTCGTCACCCAGCAAGGGTGCGAA > 1:158620/1‑150CCAGTCGAAACCGGACATGCCATCCATTTTGTCTTGGGCATCGCTGCCGACGAAGATATCGTCGCCGCCCTCACCGATCATTTCGTCGAAGCCGCCGCCCCCGACGAAGATGTCGTTGCCAATGACTTCGTCACCCAGCAAGGGTGCGAA < 2:107448/150‑1 CAGTCGAAACCGGACATGCCATCCATTTTGTCTTGGGCATCGCTGCCGACGAAGATATCGTCGCCGCCCTCACCGATCATTTCGTCGAAGCCGCCGCCCCCGACGAAGATGTCGTTGCCAATGACTTCGTCACCCAGCAAGGGTGCGAAG < 2:158620/150‑1 TCGTCGCCGCCCTCACCGATCATTTCGTCGAAGCCGCCGCCCCCGACGAAGATGTCGTTGCCAATGACTTCGTCACCCAGCAAGGGTGCGAAG < 2:681606/93‑1 TCGTCGCCGCCCTCACCGATCATTTCGTCGAAGCCGCCGCCCCCGACGAAGATGTCGTTGCCAATGACTTCGTCACCCAGCAAGGGTGCGAAG > 1:681606/1‑93 AATGACTTCGTCACCCAGCAAGGGTGCGAAGTCATTGGCAACGACATCTTCGTCGGGGGCGGCGGCTTCGACGAAATGATCGGTGAGGGCGGCGACGATATCTTCGTCGGCAGCGATGCCCAAGACAAAATGGATGGCATGTCCGGTTTC > 2:634068/1‑150 TTCGTCACCCAGCAAGGGTGCGAAGTCATTGGCAACGACATCTTCGTCGGGGGCGGCGGCTTCGACGAAATGATCGGTGAGGGCGGCGACGATATCTTCGTCGGCAGCGATGCCCAAGCCAAAATGGATGGCATGTCCGGTTGCTACTGG > 1:186562/1‑150 TTCGTCACCCAGCAAGGGTGCGAAGTCATTGGCAACGACATCTTCGTCGGGGGCGGCGGCTTCGACGAAATGATCGGTGAGGGCGGCGACGATATCTTCGTCGGCAGCGATGCCCAA > 1:1102551/1‑117 TTCGTCACCCAGCAAGGGTGCGAAGTCATTGGCAACGACATCTTCGTCGGGGGCGGCGGCTTCGACGAAATGATCGGTGAGGGCGGCGACGATATCTTCGTCGGCAGCGATGCCCAA < 2:1102551/117‑1 TTCGTCACCCAGCAAGGGTGCGAAGTCATTGGCAACGACATCTTCGTCGGGGGCGGCGG < 1:581104/59‑1 TTCGTCACCCAGCAAGGGTGCGAAGTCATTGGCAACGACATCTTCGTCGGGGGCGGCGG > 2:581104/1‑59 TTCGTCACCCAGCAAGGGTGCGAAGTCATTGGCAACGACATCTTCGTCGGGGG > 2:9734/1‑53 TTCGTCACCCAGCAAGGGTGCGAAGTCATTGGCAACGACATCTTCGTCGGGGG < 1:9734/53‑1 TCACCCAGCAAGGGTGCGAAGTCATTGGCAACGACATCTTCGTCGGGGGCGGCGGCTTCGACGAAATGATCGGTGAGGGCGGCGACGATATCTTCGTCGGCAGCGATGCTCAAGACTATATGGATGGGAGGTCCGGTGTCGGCTGGGTCc > 1:7975/1‑149 AAGTCATTGGCAACGACATTTTCTTCTGGTTCTGCGGCTTCGACGAAATGATCGGTGAGGGCGGCGAAGATATCTTCGTCGGCAGCGATGCCCAAGACAAAATGGATGGCATGTCCGGTTTCGACTGGGTCACCAACAAGAATGATCGCG < 1:882746/150‑1 GTCATTGGCAACGACATCTTCGTCGGGGGCGGCGGCTTCGACGAAATGATCGGTGAGGGCGGCGACGATATCTTCGTCGGCAGCGATGCCCAAGACAAAATGGATGGCATGTCCGGTTTCGACTGGGTCACCAACAAGAATGATCGCGTC < 1:1158332/150‑1 TCATTGGCAACGACATCTTCGTCGGGGGCGGCGGCTTCGACGAAATGATCGGTGAGGGCGGCGACGATATCTTCGTCGGCAGCGATGCCCAAGACAAAATGGATGGCATGTCCGGTTTCGACTGGGTCACCAACAAGAATGATCGCGTCG > 1:217132/1‑150 CCAGTCGAAACCGGACATGCCATCCATTTTGTCTTGGGCATCGCTGCCGACGAAGATATCGTCGCCGCCCTCACCGATCATTTCGTCGAAGCCGCCGCCCCCGACGAAGATGTCGTTGCCAATGACTTCGTCACCCAGCAAGGGTGCGAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2914293‑2914142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaagtCATTGGCAACGACATCTTCGTCGGGGGCGGCGGCTTCGACGAAATGATCGGTGAGGGCGGCGACGATATCTTCGTCGGCAGCGATGCCCAAGACAAAATGGATGGCATGTCCGGTTTCGACTGGGTCACCAACAAGAATGATCGCGTCG > NC_002947/2914170‑2914318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |