| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2957115 = | 45 (0.600) | 11 (0.170) | 9/224 | NT | 18.4% | intergenic (+27/‑169) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| ? | NC_002947 | 2957202 = | 58 (0.880) | intergenic (+114/‑82) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein | |||||
CTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2957278‑2957115‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCACTGA > NC_002947/2957202‑2957347 CTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGT > 1:1016521/1‑150 TCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTG > 2:588507/1‑150 TCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTG > 2:195187/1‑150 ACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGC > 1:1313194/1‑150 GACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTC < 1:1753116/150‑1 GACCGTCGTGGCGATCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCTGGTGTTCGCGGGCGTGCCCGCTC > 2:1553284/1‑150 TCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGGGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGAGGTACCTGTTACTTGCGCAGGAAGGACCG > 2:385028/1‑150 TCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCAC > 1:1239502/1‑150 GCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGAC < 2:902827/99‑1 GCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGAC > 1:902827/1‑99 TGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAG‑GGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTT < 2:23148/114‑1 TGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAG‑GGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTT > 1:23148/1‑114 CCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACA > 1:1237163/1‑150 CCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGAGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAACGACCGCCACGACGGGCGTTTGGAGTACA > 2:1741840/1‑150 aGCGAATCAGGCGACACGGTAGATGGCACCGGCTTCGCCGATGTTCGCGGGCGTGAACGCTCCCACAGAGGGAGAGCGGCGTGCTTGCGGACTGTGTGGTAAATGTTCATTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAA > 2:1341968/2‑150 CGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCC > 2:120010/1‑57 CGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCC < 1:120010/57‑1 ACCGGCTTCTCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAA < 1:1341968/150‑1 CGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTC < 2:1239502/150‑1 GCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCC < 2:736036/150‑1 CCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGCCGTTTGGAGGAAAAATGTACACTCTCCAATTCTGGCAACAACGCGCCCCCGACCTCTACCTTCCGtgccc > 2:641517/1‑145 CGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGCCTCAAGCAGCTCGCAGGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCAT < 2:1911127/150‑1 CCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCAC < 1:101576/150‑1 CCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCACT < 2:1880481/150‑1 CCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCACT > 2:810613/1‑150 CACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCACTG > 2:1102752/1‑150 ACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCACTGA > 2:1623860/1‑150 ACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCACTGA < 2:785692/150‑1 CTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2957278‑2957115‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCACTGA > NC_002947/2957202‑2957347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |