| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2957129 | 46 (0.620) | 4 (0.060) | 4/224 | NT | 7.5% | intergenic (+41/‑155) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| ? | NC_002947 | = 2957186 | 58 (0.880) | intergenic (+98/‑98) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein | |||||
GACCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2956968‑2957129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcaTGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGT < NC_002947/2957186‑2957041 GACCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTG > 1:1426191/1‑150GACCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTG > 1:604868/1‑150 CCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGG > 1:1662613/1‑150 GCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG < 2:622967/150‑1 CCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAGGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGG < 1:472296/150‑1 CGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGG < 1:459437/150‑1 CGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGG > 2:1575501/1‑150 GATGATCATGGCCCCGGCCTTGATCGCCAACCACGGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGtgcggc < 2:1375081/150‑7 GATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCA < 2:604868/150‑1 CCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCATGCCCGCGAAT > 1:286607/1‑150 GGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGG < 2:286607/150‑1 AGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGTGCTTCCCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGC < 2:1313891/150‑1 AAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGT < 1:1575501/150‑1 TGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGG < 1:1493777/150‑1 CGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGG < 1:816927/150‑1 GGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGG < 2:36663/150‑1 GGCATGCCCGCGAATCAGGCGACACGGTGGATGGCCCCGCGGCCGCCGTTTTTCGCGGGCGTGCCCGCCACCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGT < 1:887966/150‑1 GACCCTGGGCCGGATGATCATGGCCCCGGCCTTGATCGCCAACCACAGCGAGCTGGATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2956968‑2957129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcaTGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGT < NC_002947/2957186‑2957041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |