| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3259482 | 60 (0.800) | 7 (0.100) | 5/246 | NT | 10.5% | coding (753/1452 nt) | PP_2856 | hypothetical protein |
| ? | NC_002947 | = 3259516 | 61 (0.840) | coding (719/1452 nt) | PP_2856 | hypothetical protein | |||||
TCGACGCGCTGTGGCTGCCGCTGGCAGAGCCACTGGCACCCCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3259331‑3259482‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgACGACCGCAGCTCGTCTTCGAGCTTCAGCGTCGCCGGTGCGCAAAGCGCCAGTTCCAGCGGCTCCAGTGGCTGGAACGCCAGCGGCTCGCAATCCAGCAATGCCAGCGGCTCCCACAACTCGAGCGCAAGTGGCTCGTTCGGCTGGG < NC_002947/3259516‑3259370 TCGACGCGCTGTGGCTGCCGCTGGCAGAGCCACTGGCACCTCAGCCGAACGAGCCACTTGCGCTCGCGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCAC < 1:1447161/150‑1TCGACGCGCTGTGGCTGCCGCTGGCAGAGCCACTGGCACCCCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCAC > 1:1643783/1‑150 GACGCGCTGTGGCTGCCGCTGGCAGAGCCACTGGCACCCCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCG > 1:817815/1‑150 GACGCGCTGTGGCTGCCGCTGGCAGAGCCACTGGCACCCCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCG < 2:143796/150‑1 GCTGTGGCTGCCGCTGGCAGAGCCACTGGCACCCCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGACGAC > 2:1623583/1‑150 CCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGACGACCGCAGCTCGTCTTCGAGCTTCAGCGTCGCCGGT < 1:1623583/150‑1 CCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGACGACCGCAGCTCGTCT < 1:229567/129‑1 CCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGACGACCGCAGCTCGTCT > 2:229567/1‑129 TTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGACGACCGCAGCTCGTCTTCGAGCTTCAGCGTCGCCGG > 1:1356157/1‑95 TTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGACGACCGCAGCTCGTCTTCGAGCTTCAGCGTCGCCGG > 1:1863262/1‑95 TTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGACGACCGCAGCTCGTCTTCGAGCTTCAGCGTCGCCGG < 2:1356157/95‑1 TTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCGACGACCGCAGCTCGTCTTCGAGCTTCAGCGTCGCCGG < 2:1863262/95‑1 CCGACGACCGCAGCTCGTCTTCGAGCTTCAGCGTCGCCGGTGCGCAAAGCGCCAGTTCCAGCGGCTCCAGTGGCTGGAACGCCAGCGGCTCGCAATCCAGCAATGCCAGCGGCTCCCACAACTCGAGCGCAAGTGGCTCGTTCGGCTGGG < 2:1878802/150‑1 TCGACGCGCTGTGGCTGCCGCTGGCAGAGCCACTGGCACCCCAGCCGAACGAGCCACTTGCGCTCGAGTTGTGGGAGCCGCTGGCATTGCTGGATTGCGAGCCGCTGGCGTTCCAGCCACTGGAGCCGCTGGAACTGGCGCTTTGCGCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3259331‑3259482‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgACGACCGCAGCTCGTCTTCGAGCTTCAGCGTCGCCGGTGCGCAAAGCGCCAGTTCCAGCGGCTCCAGTGGCTGGAACGCCAGCGGCTCGCAATCCAGCAATGCCAGCGGCTCCCACAACTCGAGCGCAAGTGGCTCGTTCGGCTGGG < NC_002947/3259516‑3259370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |