New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3323780	77 (1.030)	5 (0.070)	5/248	NT	6.3%	coding (156/858 nt)	PP_2923	hypothetical protein
	?	NC_002947	= 3323804	73 (1.000)					coding (132/858 nt)	PP_2923	hypothetical protein

CGCGCCACAGCACTTCATACAGCAGGTTCCAGCGCTGCTCGCCACGGTAGCGAGAGGCCTGCTCCAACTGGCTCAGCAGTGCGGCCGGGACTTTGGCCCGGAAAGGGCCCGGCCCGTCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3323659‑3323780 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGTGCTGGCCGTGCCGGCAGCGCCGCCTGACGGGCCGGGCCCTTTCCGGGCCAAAGTCCCGGCCGCACTGCTGAGCCAGTTGGAGCAGGCCTCTCGCTACCGTGGCGAGCAGCGCTGGAACCTGCTGTATGAAGTGCTGTGGCGCGTC  <  NC_002947/3323804‑3323657                                                                                                                                                                                                                                                                                CGCGCCACAGCACTTCATACAGCAGGTTCCAGCGCTGCTCGCCACGGTAGCGAGAGGCCTGCTCCAACTGGCTCAGCAGTGCGGCCGGGACTTTGGCCCGGAAAGGGCCCGGCCCGTCAGGCCGTGCTGGCCGTGCCGGCAGCGCCGCCT                                                                                                                          <  1:1855631/150‑1                                         GCCACGGTAGCGAGAGGCCTGCTCCAACTGGCTCAGCAGTGCGGCCGGGACTTTGGCCCGGAAAGGGCCCGGCCCGTCAGGCCGTGCTGGCCGTGCCGGCAGCGCCGCCTGACG                                                                                                                      <  1:336077/114‑1                                         GCCACGGTAGCGAGAGGCCTGCTCCAACTGGCTCAGCAGTGCGGCCGGGACTTTGGCCCGGAAAGGGCCCGGCCCGTCAGGCCGTGCTGGCCGTGCCGGCAGCGCCGCCTGACG                                                                                                                      >  2:336077/1‑114                                                          CCTGCTCCATCTGGCTCAGCAGTGCGGCCGGGACTTTGGCCCGGAAAGGGCCCGGCCCGTCAGGCCGTGCTGGCCGTGCCGGCAGCGCCGCCTGACGGGCCGGG                                                                                                               <  2:968785/104‑1                                                          CCTGCTCCAACTGGCTCAGCAGTGCGGCCGGGACTTTGGCCCGGAAAGGGCCCGGCCCGTCAGGCCGTGCTGGCCGTGCCGGCAGCGCCGCCTGACGGGCCGGG                                                                                                               >  1:968785/1‑104                                                                                                                         GCCGTGCTGGCCGTGCCGGCAGCGCCGCCTGACGGGCCGGGCCCTTTCCGGGCCAAAGTCCCGGCCGCACTGCTGAGCCAGTTGGAGCAGGCCTCTCGCTACCGTGGCGAGCAGCGCTGGAACCTGCTGTATGAAGTGCTGTGGCGCGTC  <  1:206556/150‑1                                                                                                                         GCCGTGCTGGCCGTGCCGGCAGCGCCGCCTGACGGGCCGGGCCCTTTCCGGGCCAAAGTCCCGGCCGCACTGCTGAGCCAGTTGGAGCAGGCCTCTCGCTACCGTGGCGAGCAGCGCTGGAACCTGCTGTATGAAGTGCTGTGGCGCGTC  >  2:332940/1‑150                                                                                                                         GCCGTGCTGGCCGTGCCGGCAGCGCCGCCTGACGGGCCGGGCCCTTTCCGGGCCAAAGTCCCGGCCGCAC                                                                                  <  1:1087181/70‑1                                                                                                                         GCCGTGCTGGCCGTGCCGGCAGCGCCGCCTGACGGGCCGGGCCCTTTCCGGGCCAAAGTCCCGGCCGCAC                                                                                  >  2:1087181/1‑70                                                                                                                                                                                                                                                                                CGCGCCACAGCACTTCATACAGCAGGTTCCAGCGCTGCTCGCCACGGTAGCGAGAGGCCTGCTCCAACTGGCTCAGCAGTGCGGCCGGGACTTTGGCCCGGAAAGGGCCCGGCCCGTCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3323659‑3323780 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGTGCTGGCCGTGCCGGCAGCGCCGCCTGACGGGCCGGGCCCTTTCCGGGCCAAAGTCCCGGCCGCACTGCTGAGCCAGTTGGAGCAGGCCTCTCGCTACCGTGGCGAGCAGCGCTGGAACCTGCTGTATGAAGTGCTGTGGCGCGTC  <  NC_002947/3323804‑3323657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.