| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3391019 = | 64 (0.860) | 4 (0.060) | 4/244 | NT | 6.2% | coding (186/1257 nt) | PP_2994 | FMN‑binding oxidoreductase |
| ? | NC_002947 | 3391041 = | 60 (0.840) | coding (208/1257 nt) | PP_2994 | FMN‑binding oxidoreductase | |||||
CCAAGATTGGACTGCATCTGCCGCCCTGGGTGGTTTATCTGCAACCAGAACTGCGCACCGCCGGATCGACCAATACGCGCCCAGCGCTTGAACTTGTCCAGTTGCTGATCGTCCTGTAATACCACGCCACCCGGCCCGGTCATGGCGCGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3391171‑3391019‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgGGTGGCGTGGTATTACAGGACGATCAGCAACTGGACAAGTTCAAGCGCTGG > NC_002947/3391041‑3391091 CCAAGATTGGACTGCATCTGCCGCCCTGGGTGGTTTATCTGCAACCAGAACTGCGCACCGCCGGATCGACCAATACGCGCCCAGCGCTTGAACTTGTCCAGTTGCTGATCGTCCTGTAATACCACGCCACCCGGCCCGGTCATGGCGCGG > 1:1287626/1‑150CCAAGATTGGACTGCATCTGCCGCCCTGGGTGGTTTATCTGCAACCAGAACTGCGCACCGCCGGATCGACCAATACGCGCCCAGCGCTTGAACTTGTCCAGTTGCTGATCGTCCTGTAATACCACGCCACCCGGCCCGGTCATGGCGCGG > 1:600170/1‑150 gAAGATTGGACTGCATCTGCCGCCCTGGGTGGTTTATCTGCAACCAGAACTGCGCACCGCCGGATCGACCAATACGCGCCCAGCGCTTGAACTTGTCCAGTTGCTGATCGTCCTGTAATACCACGCCACCCGGCCCGGTCATGGCGCGGC > 1:66475/2‑150 CAAGATTGGACTGCATCTGCCGCCCTGGGTGGTTTATCTGCAACCAGAACTGCGCACTGCCGGATCGACCAATACGCGCCCAGCGCTTGAACTTGTCCAGTTGCTGATCGTCCTGTAATACCACGCCACCCGGCCCGGTCATGGCGCGGC > 1:1069595/1‑150 AAGATTGGACTGCATCTGCCGCCCTGGGTGGTTTATCTGCAACCAGAACTGCGCACCGCCGGATCGACCAATACGCGCCCAGCGCTTGAACTTGTCCAGTTGCTGATCGTCCTGTAATACCACGCCACCCGGCCCGGTCATGGCGCGGCC > 2:1570342/1‑150 GTTTATCTGCAACCAGAACTGCGCACCGCCGGATCGACCAATACGCGCCCAGCGCTTGAACTTGTCCAGTTGCTGATCGTCCTGTAATACCACGCCACCCGGCCGCGCCATGACCGGGCCGGGTGGCGTGGTATTAC > 1:102744/1‑137 GTTTATCTGCAACCAGAACTGCGCACCGCCGGATCGACCAATACGCGCCCAGCGCTTGAACTTGTCCAGTTGCTGATCGTCCTGTAATACCACGCCACCCGGCCGCGCCATGACCGGGCCGGGTGGCGTGGTATTAC < 2:102744/137‑1 CACCCGGCCCGGTCATGGCGCGGCCGGGTGGCGTGGTATTACAGGACGATCAGCAACTGGACAAGTTCAAGCGCTGG < 1:1747257/77‑1 CACCCGGCCCGGTCATGGCGCGGCCGGGTGGCGTGGTATTACAGGACGATCAGCAACTGGACAAGTTCAAGCGCTGG > 2:1747257/1‑77 CCAAGATTGGACTGCATCTGCCGCCCTGGGTGGTTTATCTGCAACCAGAACTGCGCACCGCCGGATCGACCAATACGCGCCCAGCGCTTGAACTTGTCCAGTTGCTGATCGTCCTGTAATACCACGCCACCCGGCCCGGTCATGGCGCGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3391171‑3391019‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgGGTGGCGTGGTATTACAGGACGATCAGCAACTGGACAAGTTCAAGCGCTGG > NC_002947/3391041‑3391091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |