| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3462272 = | 75 (1.010) | 6 (0.090) | 5/230 | NT | 9.0% | coding (204/1059 nt) | PP_3077 | ABC transporter permease |
| ? | NC_002947 | 3462398 = | 54 (0.800) | coding (78/1059 nt) | PP_3077 | ABC transporter permease | |||||
GCTGCTGGCAATCCTGCTGGTCAATTTCGCCATCGTCCAGGCCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3462431‑3462272‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggcctggacGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGGCGAGGCCTTCCGGCGTTCGGCCATCTGCGCGTTGGTCAGCGGGGTAGGGTTTACCTCCCACCAGG > NC_002947/3462398‑3462542 GCTGCTGGCAATCCTGCTGGTCAATTTCGCCATCGTCCAGGCCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACG > 2:6658/1‑150 cgGCTGGCAATCCTGCTGGTCAATTTCGCCATCGTCCAGGCCGCGCCGGGTGGCCCGGTGGAACACGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGC < 2:866199/148‑1 TGCTGGCAATCCTGCTGGTCAATTTCGCCATCGTCCAGGCCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCG < 1:6658/150‑1 GGCAATCCTGCTGGTCAATTTCGCCATCGTCCAGGCCGCGCCGGGTGGCGCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGGGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCT < 2:977206/150‑1 GGCAATCCTGCTGGTCAATTTCGCCATCGTCCAGGCCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCT < 2:1025358/150‑1 AATCCTGCTGGTCAATTTCGCCATCGTCCAGGCCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCGTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGA > 1:1664469/1‑150 AATCCTGCTGGTCAATTTCGCCATCGTCCAGGCCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGAATAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGA > 1:1754916/1‑150 CAGGCCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGC > 1:34126/1‑150 CAGGCCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGC > 1:1370846/1‑150 GGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGG > 1:1132957/1‑150 TGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGC < 2:34126/150‑1 GCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGGCGAGGCCTTCCGGCGTT < 2:1132957/150‑1 CGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGGCGAGGCCTTCCGGCGTTC < 2:1370846/150‑1 GCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGGCGAGGCCTTCCGGCGTTCGGCCATCTGCGCGTTG > 1:1825597/1‑122 GCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGGCGAGGCCTTCCGGCGTTCGGCCATCTGCGCGTTG < 2:1825597/122‑1 CTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGGCGAGGCCTTCCGGCGTTCGGCCATCTGCGCGTTGGTCAGCGGGGTAGGGTTTACCTCCCACCAG < 1:1128153/150‑1 TGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGGCGAGGCCTTCCGGCGTTCGGCCATCTGCGCGTTGGTCAGCGGGGTAGGGTTTACCTCCCACCAGG < 1:418845/150‑1 GACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGGCGAGGCCTTCCGGCGTTCGGCCATCTGCGCGTTGGTCAGCG < 2:1226886/124‑1 GACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGGCGAGGCCTTCCGGCGTTCGGCCATCTGCGCGTTGGTCAGCG > 1:1226886/1‑124 GCTGCTGGCAATCCTGCTGGTCAATTTCGCCATCGTCCAGGCCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3462431‑3462272‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggcctggacGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGGCGAGGCCTTCCGGCGTTCGGCCATCTGCGCGTTGGTCAGCGGGGTAGGGTTTACCTCCCACCAGG > NC_002947/3462398‑3462542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |