| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3649432 | 58 (0.780) | 4 (0.060) | 4/242 | NT | 6.1% | intergenic (+866/+825) | PP_3214/PP_3216 | hypothetical protein/cysteine dioxygenase |
| ? | NC_002947 | = 3649458 | 67 (0.940) | intergenic (+892/+799) | PP_3214/PP_3216 | hypothetical protein/cysteine dioxygenase | |||||
AGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3649281‑3649432‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGGTGGACGACGATGGCGTGCGCGCCAACATGAGCGCCTCGTGGCTGGCACAGATGGGCT < NC_002947/3649458‑3649310 AGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCCTCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCC > 2:547042/1‑150AGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACGCGTTGCCCGCC < 2:788472/150‑1 GTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCG < 2:826172/150‑1 TCAGCCCGTCGACCCCAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCCCATGTTGGCGCGCACGCCATCGACGTCCGCCAGCGCGATGCGCTCCCCGCCCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGG > 2:519110/1‑150 AGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGTCATCTGCCGGGCAGCCGCCCGGTGCC > 1:1129490/1‑150 CCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACT < 2:1129490/150‑1 CAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGTCATCTGCCGGGCAGCCACCCGGTGCCCGGCGG > 1:583080/1‑143 CAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGTCATCTGCCGGGCAGCCACCCGGTGCCCGGCGG < 2:583080/143‑1 GGTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGGTGGACGACGATGGCGTGCGCGCCAACATGAGCGCCTCGTGGCTGGCACAGATGGGC < 1:1336163/150‑1 GTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGGTGGACGACGATGGCGTGCGCGCCAACATGAGCGCCTCGTGGCTGGCACAGATGGGCT < 2:1166756/150‑1 AGTCAGCCCGTCGACCACAGCGACCTGCCAGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3649281‑3649432‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggTCATCTGCCGGGCAGCCGCCCGGTGCCCGGCGGGCAACTGGTTCAAGAGACCGACCACGTCGCCAGTGTGCGCGGGGCGCGCATCGCGCTGGTGGACGACGATGGCGTGCGCGCCAACATGAGCGCCTCGTGGCTGGCACAGATGGGCT < NC_002947/3649458‑3649310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |