New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3652905 =	54 (0.720)	6 (0.080)	5/242	NT	10.0%	coding (748/1320 nt)	PP_3218	NtaA/SnaA/SoxA family monooxygenase
	?	NC_002947	3652942 =	57 (0.800)					coding (785/1320 nt)	PP_3218	NtaA/SnaA/SoxA family monooxygenase

CGCCAGTTCGAAACTGTGGTCGGCCTGATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3653057‑3652905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcgACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGCGTTGAAGGAATTCGGGCGCAACTTCGGCTGGCA  >  NC_002947/3652942‑3653089                                                                                                                                                                                                                                                                                                               CGCCAGTTCGAAACTGTGGTCGGCCTGATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTC                                                                                                                                                         <  1:1739628/150‑1  GCCAGTTCGAAACTGTGGTCGGCCTGATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCG                                                                                                                                                        >  2:1548310/1‑150  GCCAGTTCGAAACTGTGGTCGGCCTGATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGACGTCG                                                                                                                                                        >  2:1880537/1‑150    CAGTTCGAAACTGTGGTCGGCCTGATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCG                                                                                                                                                      <  2:630319/150‑1                            ATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCG                                                                                                                                                      <  1:957421/126‑1                            ATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCG                                                                                                                                                      >  2:957421/1‑126                                                                                                              TCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGA                                                     >  1:280441/1‑141                                                                                                              TCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGA                                                     <  2:280441/141‑1                                                                                                                 GGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGA                                         >  1:1337620/1‑150                                                                                                                 GGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGA                                                                                                                    >  1:1453304/1‑75                                                                                                                 GGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGA                                                                                                                    <  2:1453304/75‑1                                                                                                                                        GCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGCTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGCGTTGAAGGAATTCGGGC                  <  2:1337620/150‑1                                                                                                                                                        CGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGCGTTGAAGGAATTCGGGCGCAACTTCGGCTGGCA  <  1:1089197/150‑1                                                                                                                                                                                                                                                                                                               CGCCAGTTCGAAACTGTGGTCGGCCTGATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3653057‑3652905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcgACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGCGTTGAAGGAATTCGGGCGCAACTTCGGCTGGCA  >  NC_002947/3652942‑3653089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.