New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3755057 | 58 (0.780) | 3 (0.040) | 3/240 | NT | 5.4% | coding (455/2202 nt) | PP_3319 | GGDEF domain‑containing sensory box protein |
? | NC_002947 | = 3755090 | 51 (0.720) | coding (488/2202 nt) | PP_3319 | GGDEF domain‑containing sensory box protein |
TGACAGCGGATATAGCCCGGGATCCGAGCTGGGAGCGTTTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3754904‑3755057 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcgccGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAATCGCTTGATCCTGGTATAGCGCAAATGTCCCAAGAACGGAGCCCTCATGCGAGAGTAATGGCAACGACCAGCAGGAGCGTAGATTGTACCCTAGCGCCAGACTGCGA < NC_002947/3755090‑3754944 TGACAGCGGATATAGCCCGGGATCCGAGCTGGGAGCGTTTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCCTTACTCTCGCCTGAGGGCTCCGTTCTTTGGACATTTGCGCTATACCAGGATCAAGCGATTG < 2:690897/150‑1 AGCGGATATAGCCCGGGATCCGAGCTGGGAGCGTTTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTACTTGTTACATTTGCGCTATACCAGGATCAAGCGATTGCGCC > 2:1893217/1‑150 TTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTG < 2:251900/150‑1 CTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAA > 1:1778881/1‑147 CTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAA < 2:1778881/147‑1 TGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAATCGCTTGATCCTGGTATAGCGCAAATGTCCCAAGAACGGAGCCCTCATGCGAGAGTAATGGCAACGACCAGCAGGAGCGTAGATTGTACCCTAGCGCCAGACTG < 1:1344849/150‑1 CGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAATCGCTTGATCCTGGTATAGCGCAAATGTCCCAAGAACGGAGCCCTCATGCGAGAGTAATGGCAACGACCAGCAGGAGCGTAGATTGTACCCTAGCGCCAGACTGCG < 2:1262165/150‑1 GCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAATCGCTTGATCCTGGTATAGCGCAAATGTCCCAAGAACGGAGCCCTCATGCGAGAGTAATGGCAACGACCAGCAGGAGCGTAGATTGTACCCTAGCGCCAGACTGCGA > 1:87066/1‑150 TGACAGCGGATATAGCCCGGGATCCGAGCTGGGAGCGTTTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3754904‑3755057 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcgccGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAATCGCTTGATCCTGGTATAGCGCAAATGTCCCAAGAACGGAGCCCTCATGCGAGAGTAATGGCAACGACCAGCAGGAGCGTAGATTGTACCCTAGCGCCAGACTGCGA < NC_002947/3755090‑3754944 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |