| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3976261 | 59 (0.790) | 4 (0.060) | 4/246 | NT | 6.2% | coding (651/1014 nt) | PP_3506 | magnesium chelatase subunit ChII |
| ? | NC_002947 | = 3976311 | 64 (0.890) | coding (601/1014 nt) | PP_3506 | magnesium chelatase subunit ChII | |||||
CCACTTCTTCGATAGCTGCAGCCCCACGCCAGGCACAGTGGGCGCGCGCAGCGCGCAGCCACACCAGGTCGGCGCGCAGGCCGTCCACGCCGGCGGCGTAGCAGCGCTCGGTAATCCAGGCAAGCGCCTGGTCATCCAGGGCAATGTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3976110‑3976261‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCAGGCCCAGGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTGGCCGACATTGCCCTGGATGACCAGGCGCTTGCCTGGATTACCGAGCGCTGCTACGCCGCCGGCGTGGACGGCCTGCGCGCCGACCTGGTGTGGCTGCG < NC_002947/3976311‑3976163 CCACTTCTTCGATAGCTGGAGGCCCACGTCAGGCACAGTGGGCGCGCGCAGCGCGCAGCCACACCAGGTCGGCGCGCAGGCTGTCAATGCCGGCGGTGTAGCAGCGCTCGGTAATCCAGACAAGCGCCTGGTCTTCCAGGGCAATGTCGG < 2:918312/150‑1CCACTTCTTCGATAGCTGCAGCCCCACGCCAGGCACAGTGGGCGCGCGCAGCGCGCAGCCACACCAGGTCGGCGCGCAGGCCGTCCACGCCGGCGGCGTAGCAGCGCTCGGTAATCCAGGCAAGCGCCTGGTCATCCAGGGCAATGTCGG < 1:1632371/150‑1 CACTTCTTCGCTACGCGCATCCCCACGCCAGGCACAGTGGGCGCGCGCAGCGCGCAGCCACACCAGGTCGGCGCGCAGGCCGTCCACGCCGGCGGCGTAGCAGCGCTCGGTAATCCAGGGAAGCGCCTGGTCATCCAGGGCAATGTCGGC > 2:1019934/1‑150 TTCTTCGATAGCTGCAGCCCCACGCCAGGCACAGTGGGCGCGCGCAGCGCGCAGCCACACCAGGTCGGCGCGCAGGCCGTCCACGCCGGCGGCGTAGCAGCGCTCGGTAATCCAGGCAAGCGCCTGGTCATCCAGGGCAATGTCGGC > 1:102774/1‑147 TTCTTCGATAGCTGCAGCCCCACGCCAGGCACAGTGGGCGCGCGCAGCGCGCAGCCACACCAGGTCGGCGCGCAGGCCGTCCACGCCGGCGGCGTAGCAGCGCTCGGTAATCCAGGCAAGCGCCTGGTCATCCAGGGCAATGTCGGC < 2:102774/147‑1 GCGCAGGCCGTCCACGCCGGCGGCGTAGCAGCGCTCGGTAATCCAGGCAAGCGCCTGGTCATCCAGGGCAATGTCGGCCCAGGCCCAGGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTGGCC < 1:1416664/133‑1 GCGCAGGCCGTCCACGCCGGCGGCGTAGCAGCGCTCGGTAATCCAGGCAAGCGCCTGGTCATCCAGGGCAATGTCGGCCCAGGCCCAGGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTGGCC > 2:1416664/1‑133 TCGGTAATCCAGGCAAGCGCCTGGTCATCCAGGGCAATGTCGGCCCAGGCCCAGGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTG > 1:1887683/1‑96 TCGGTAATCCAGGCAAGCGCCTGGTCATCCAGGGCAATGTCGGCCCAGGCCCAGGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTG < 2:1887683/96‑1 GGCCCAGGCCCAGGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTGGCCGACATTGCCCTGGATGACCAGGCGCTTGCCTGGATTACCGAGCGCTGCTACGCCGCCGGCGTGGACGGCCTGCGCGCCGACCTGGTGTGGCT > 1:1845052/1‑150 GGCCCAGGCCCAGGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTGGCCGACATTGCCCTGGATGACCAGGCGCTTGCCTGGATTACCGAGCGCTGCTACGCCGCCGGCGTGGACGGCCTGCGCGCCGACCTGGTGTGGCT > 2:1301689/1‑150 CCCAGGCCCAGGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTGGCCGACATTGCCCTGGATGACCAGGCGCTTGCCTGGATTACCGAGCGCTGCTACGCCGCCGGCGTGGACGGCCTGCGCGCCGACCTGGTGTGGCTGC > 1:1019934/1‑150 CCAGGCCCATGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTGGCCGACATTGCCCTGGATGACCGGGCGCCTGCCTGGATTACCGAACGCAGCTACGCCGCCGGCGTGGACGGCCTGCGCGCCGACCTGGTGTGGCTGCG > 2:424165/1‑150 CCAGGCCCAGGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTGGCCGACATTGCCCTGGATGACCAGGCGCTTGCCTGGATTACCGAGCGCTGCTACGCCGCCGGCGTGGACGGCCTGCGCGCCGACCTGGTGTGGCTGCG > 1:1292490/1‑150 CCACTTCTTCGATAGCTGCAGCCCCACGCCAGGCACAGTGGGCGCGCGCAGCGCGCAGCCACACCAGGTCGGCGCGCAGGCCGTCCACGCCGGCGGCGTAGCAGCGCTCGGTAATCCAGGCAAGCGCCTGGTCATCCAGGGCAATGTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3976110‑3976261‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCAGGCCCAGGCGCAACTGCGCGAGCGCTGCCACGCGGCGCGCCAGGCCTTGGCCGACATTGCCCTGGATGACCAGGCGCTTGCCTGGATTACCGAGCGCTGCTACGCCGCCGGCGTGGACGGCCTGCGCGCCGACCTGGTGTGGCTGCG < NC_002947/3976311‑3976163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |