| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4243577 = | 84 (1.130) | 4 (0.060) | 4/240 | NT | 5.3% | coding (205/708 nt) | PP_3720 | NAD(P)H quinone oxidoreductase |
| ? | NC_002947 | 4243615 = | 63 (0.890) | coding (167/708 nt) | PP_3720 | NAD(P)H quinone oxidoreductase | |||||
AGGTCAGTGACTTGTACGCCATGGGCTGGAACCCGGTGGCCAGTGCCGATGACTTTACCCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4243672‑4243577‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctggGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGCCGTGAACGATTGCGGTTCGGGGTGAGCGTGGACG > NC_002947/4243615‑4243761 AGGTCAGTGACTTGTACGCCATGGGCTGGAACCCGGTGGCCAGTGCCGATGACTTTACCCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTG > 1:436388/1‑95AGGTCAGTGACTTGTACGCCATGGGCTGGAACCCGGTGGCCAGTGCCGATGACTTTACCCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTG < 2:436388/95‑1 ACCCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGC > 1:886495/1‑81 ACCCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGC < 2:886495/81‑1 CCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCC > 1:465683/1‑128 CCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCC < 2:465683/128‑1 GCTGGGTAAAGTCATCGGCACTGGCTACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGCCGTGAACGATTGCGGTTCGGGGTGAGCGTGGA < 1:85907/150‑1 GCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGCCGTGAACGATTGCGGTTCGGGGTGAGCGTGGA < 1:290483/150‑1 GCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGCCGTGAACGATTGCGGTTCGGGGTGAGCGTGGA < 1:720700/150‑1 TGGGTAAAGTCATCGGCACTGGCCACCGGGTGCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGCCGTGAACGATTGCGGTTCGGGGTGAGCGTGNACG < 2:1186397/150‑1 GGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGCCGTGAACGATTGCGGTTCGGGGTGA < 1:1539254/139‑1 GGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGCCGTGAACGATTGCGGTTCGGGGTGA > 2:1539254/1‑139 AGGTCAGTGACTTGTACGCCATGGGCTGGAACCCGGTGGCCAGTGCCGATGACTTTACCCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4243672‑4243577‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctggGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGCCGTGAACGATTGCGGTTCGGGGTGAGCGTGGACG > NC_002947/4243615‑4243761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |