New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4450521 | 102 (1.370) | 10 (0.140) | 7/252 | NT | 9.1% | coding (81/3564 nt) | nicB | nicotinate dehydrogenase subunit B |
? | NC_002947 | = 4450550 | 98 (1.320) | coding (110/3564 nt) | nicB | nicotinate dehydrogenase subunit B |
GTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4450372‑4450521 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cACGCCCTTGGCCACAGGGCCTGAGGGCGGGGTGATCTGGTC < NC_002947/4450550‑4450510 GTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACC > 2:153658/1‑150 GAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACC > 1:1192629/1‑128 GAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACC < 2:1192629/128‑1 AAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGA > 1:1052116/1‑150 CTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGAGGGCG > 2:940343/1‑150 TGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGAGGGCGG < 2:997093/150‑1 GCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGAGGGCGGG < 1:940343/150‑1 GCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTTGGCCACAGGGCCTGAGGGCGGG < 2:1052116/150‑1 GCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACAAGTTCACCCCGCCCTTGGCCACAGGGCCTGAGGGCGGG < 1:832608/150‑1 CACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCACGCCCTTGGCCACAGGGCCTGAGGGCGGGGTGATCTGGTC > 1:143917/1‑116 CACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCACGCCCTTGGCCACAGGGCCTGAGGGCGGGGTGATCTGGTC < 2:143917/116‑1 CCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCACGCCCTTGGCCACAGGGCCTGATGGCGGG < 2:898930/85‑1 CCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCACGCCCTTGGCCACAGGGCCTGAGGGCGGG > 1:898930/1‑85 GTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4450372‑4450521 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cACGCCCTTGGCCACAGGGCCTGAGGGCGGGGTGATCTGGTC < NC_002947/4450550‑4450510 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |