| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4700803 | 86 (1.150) | 6 (0.090) | 4/226 | NT | 6.4% | intergenic (‑70/+80) | kdpD/kdpC | sensor protein/potassium‑transporting ATPase subunit C |
| ? | NC_002947 | = 4700847 | 98 (1.480) | intergenic (‑114/+36) | kdpD/kdpC | sensor protein/potassium‑transporting ATPase subunit C | |||||
GCCGGGGGCAGCGCCCAGGAACACCTTCAGCCGGCCCCGGCCGGTGCGTGGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAGCGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4700641‑4700803‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggttCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGGGTAAACCCGCTCCTACACGTTAAGGGGGCTTTCCCTGAAGCGGCGGACTGTTGGACAAAGTAAAGGATGAAACATGAGTGACTCCGCCCGCGCCGATGCGCTGTTGG < NC_002947/4700847‑4700700 GCCGGGGGCAGCGCCCAGGAACACCTTCAGCCGGCCCCGGCCGGTGCGTGGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGT < 1:121726/150‑1GCCGGGGGCAGCGCCCAGGAACACCTTCAGCCGGCCCCGGCCGGTGCGTGGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGT < 1:271826/150‑1GCCGGGGGCAGCGCCCAGGAACACCTTCAGCCGGCCCCGGCCGGTGCGTGGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGT < 2:33555/150‑1GCCGGGGGCAGCGCCCAGGAACACCTTCAGCCGGCCCCGGCCGGTGCGTGGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCACTTCAGGGAAAGCCCCCTTAACGT < 2:1282836/150‑1 GGGGGCAGCGCCCAGGAACACCTTCAGCCGGCCCCGGCCGGTGCGTGGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTA < 2:1215202/150‑1 GGGGCAGCGCCCAGGAACACCTTCAGCCGGCCCCGGCCGGTGCGTGGGATGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTAG < 1:415094/150‑1 GCAGCGCCCAGGAACACCGTCAGCCGGCCCCGGCCGGTGCGCTGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAG > 2:1499831/1‑150 CGCCCAGGAACACCTTCAGCCGGCCCCGGCCGGTGCGTGGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAGCGGG < 2:818161/150‑1 CCCAGGAACACCTTCAGCCGGCCCCGGCCGGTGCGTGGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAGCGGGTT > 1:717510/1‑150 CTTCAGCCGGCCCCGGCCGGTGCGTGGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAGCGGGTTCACCCGCGAAT > 1:569029/1‑150 ggTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAGCGGGTTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGG < 2:841661/148‑1 GTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAGCGGGTTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGG < 1:601298/150‑1 GTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAGCGGGTTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGG < 1:287096/150‑1 GCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAGCGGGTTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCG < 2:1781243/79‑1 GCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAGCGGGTTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCG > 1:1781243/1‑79 TGTAGGAGCGGGTTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGGGGAAACCCGCTCCTACACGTTAAGGGGGCTTTCCCTGAAGCGGCAGACTGTTGGACAAAGTAAAGGATGAAACATGAGTGACTACGCCCGCGCCG > 2:1000681/1‑150 GCGGGTTCACCCGCGAATGCGGTGGTGGGGCCACGGACGTATGGGCGGGGAAACCCGCTCCTACACGTTAAGGGGGCTTTCCCTGAAGCGGCGGACTGTTGGACAAAGTAAAGGATGAAACATGAGTGACTCCGCCCGCGCCGATGCGCT > 1:1780717/1‑150 tGGTTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGGGTAAACCCGCTCCTACACGTTAAGGGGGCTTTCCCTGAAGCGGCGGACTGTTGGACAAAGTAAAGGATGAAACATGAGTGACTCCGCCCGCGCCGATGCGCTGT > 2:423726/2‑150 GGTTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGGGTAAACCCGCTCCTACACGTTAAGGGGGCTTTCCCTGAAGCGGCGGACTGTTGGACAAAGTAAAGGATGAAACATGAGTGACTCCGCCCGCGCCGATGCGCTGTT < 1:473373/150‑1 GTTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGGGTAAACCCGCTCCTACACGTTAAGGGGGCTTTCCCTGAAGCGGCGGACTGTTGGACAAAGTAAAGGATGAAACATGAGTGACTCCGCCCGCGCCGATGCGCTGTTG > 1:986576/1‑150 GTTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGGGTAAACCCGCTCCTACACGTTAAGGGGGCTTTCCCTGAAGCGGCGGACTGTTGGACAAAGTAAAGGATGAAACATGAGTGACTCCGCCCGCGCCGATGCGCTGTTG > 2:298926/1‑150 gTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTAGGCGCGGGTAAACCCGCTCCTACACGTTAAGGGTGCTTTCCCTGAAGCGGCGGACTGTTGGACAAAGGAAAGGATGAAACATGAGTGACTCCGCCCGCGCCGATGCGCTGTTGG < 1:582762/149‑1 TTCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGGGTAAACCCGCTCCTACACGTTAAGGGGGCTTTCCCTGAAGCGGCGGACTGTTGGACAAAGTAAAGGATGAAACATGAGTGACTCCGCCCGCGCCGATGCGCTGTTGG < 1:924717/150‑1 GCCGGGGGCAGCGCCCAGGAACACCTTCAGCCGGCCCCGGCCGGTGCGTGGGAGGTTGGCCAACAGCGCATCGGCGCGGGCGGAGTCACTCATGTTTCATCCTTTACTTTGTCCAACAGTCCGCCGCTTCAGGGAAAGCCCCCTTAACGTGTAGGAGCGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4700641‑4700803‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggttCACCCGCGAATGCGGTGGTGGTGCCACTGACGTATTCGCGGGTAAACCCGCTCCTACACGTTAAGGGGGCTTTCCCTGAAGCGGCGGACTGTTGGACAAAGTAAAGGATGAAACATGAGTGACTCCGCCCGCGCCGATGCGCTGTTGG < NC_002947/4700847‑4700700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |