| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4758107 | 69 (0.930) | 4 (0.060) | 4/238 | NT | 5.4% | coding (1335/1413 nt) | ompQ | outer membrane pyoverdine efflux protein |
| ? | NC_002947 | = 4758116 | 75 (1.070) | coding (1344/1413 nt) | ompQ | outer membrane pyoverdine efflux protein | |||||
CAACGCCAGTGGCAGGATCAGGAAGTGGAACAATCACGCATCGCCTTCCAGCTGGCCGAGCGCCGCTACCGCGCCGGCGCCGAGACCTTGCTGACCGTGCTCGACACCCAGCGCAGCCTGTACCAGGCCCAGGACCAGCAGGCCCGCCTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4757955‑4758107‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcagTTGGCTTAGCTGCAGGCGGGCCTGCTGGTCCTGGGCCTGGTACAGGCTGCGCTGGGTGTCGAGCACGGTCAGCAAGGTCTCGGCGCCGGCGCGGTAGCGGCGCTCGGCCAGCTGGAAGGCGATGCGTGATTGTTCCACTTCCTG < NC_002947/4758116‑4757973 CAACGCCAGTGGCAGGATCAGGAAGTGGAACAATCACGCATCGCCTTCCAGCTGGCCGAGCGCCGCTACCGCGCCGGCGCCGAGACCTTGCTGACCGTGCTCGACACCCAGCGCAGCCTGTACCAGGCCCAGGACCAGCAGGCCCGCCTG < 2:356543/150‑1 CCAGTGGCAGGATCAGGAAGTGGAACAATCACGCATCGCCTTCCAGCTGGCCGAGCGCCGCTACCGCGCCGGCGCCGAGACCTTGCTGACCGTGCTCGACACCCAGCGCAGCCTGTACCAGGCCCAGGACCAGCAGGCGGGCCTGCtggt < 1:742031/150‑5 CTTGCTGACCGTGCTCGACACCCAGCGCAGCCTGTACCAGGCCCAGGACCAGCAGGCCCGCCTGCAGTTGGCTTAGCTGCAGGC < 1:1532534/84‑1 CTTGCTGACCGTGCTCGACACCCAGCGCAGCCTGTACCAGGCCCAGGACCAGCAGGCCCGCCTGCAGTTGGCTTAGCTGCAGGC > 2:1532534/1‑84 TTGCTGACCGTGCTCGACACCCAGCGCAGCCTGTACCAGGCCCAGGACCAGCAGGCCCGCCTGCAGTTGGCTTAGCTGCAGGCGG < 1:1797924/85‑1 TTGCTGACCGTGCTCGACACCCAGCGCAGCCTGTACCAGGCCCAGGACCAGCAGGCCCGCCTGCAGTTGGCTTAGCTGCAGGCGG > 2:1797924/1‑85 GCCTGCAGTTGGCTTAGCTGCAGGCGGGCCTGCTGGTCCTGGGCCTGGTACAGGCTGCGCTGGGTGTCGAGCACGGTCAGCAAGGTCTCGGCGCCGGCGCGGTAGCGGCGCTCGGCCAGCTGGAAGGCGATGCGTGATTGTTCCACTTCC < 1:1480176/150‑1 GCCTGCAGTTGGCTTAGCTGCAGGCGGGCCTGCTGGTCCTGGGCCTGGTACAGGCTGCGCTGGGTGTCGAGCACGGTCAGCAAGGTCTCGGCGCCGGCGCGGTAGCGGCGCTCGGCCAGCTGGAAGGCGATGCGTGATTGTTCCACTTCC < 2:1393530/150‑1 CCTGCAGTTGGCTTAGCTGCAGGCGGGCCTGCTGGTCCTGGGCCTGGTACAGGCTGCGCTGG < 1:835185/62‑1 CCTGCAGTTGGCTTAGCTGCAGGCGGGCCTGCTGGTCCTGGGCCTGGTACAGGCTGCGCTGG > 2:835185/1‑62 CTGCAGTTGGCTTAGCTGCAGGCGGGCCTGCTGGTCCTGGGCCTGGTACAGGCTGCGCTGGGTGTCGAGCACGGTCAGCAAGGTCTCGGCGCCGGCGCGGTAGCGGCGCTCGGCCAGCTGGAAGGCGATGCGTGATTGTTCCACTTCCTG > 1:1145373/1‑150 CTGCAGTTGGCTTAGCTGCAGGCGGGCCTGCTGGTCCTGGGCCTGGTACAGGCTACGATGGTAGTCGAGCACGGTCAGCAAGGTCTCGGCGCCGGCGCGGTAGCGGCGCTCGGCCAGCTGGAAGGCGATGCGTGATTGTTCCACTTCCTG > 2:1205108/1‑150 CAACGCCAGTGGCAGGATCAGGAAGTGGAACAATCACGCATCGCCTTCCAGCTGGCCGAGCGCCGCTACCGCGCCGGCGCCGAGACCTTGCTGACCGTGCTCGACACCCAGCGCAGCCTGTACCAGGCCCAGGACCAGCAGGCCCGCCTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4757955‑4758107‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcagTTGGCTTAGCTGCAGGCGGGCCTGCTGGTCCTGGGCCTGGTACAGGCTGCGCTGGGTGTCGAGCACGGTCAGCAAGGTCTCGGCGCCGGCGCGGTAGCGGCGCTCGGCCAGCTGGAAGGCGATGCGTGATTGTTCCACTTCCTG < NC_002947/4758116‑4757973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |