New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4854911	64 (0.860)	4 (0.060)	4/242	NT	5.8%	coding (235/2076 nt)	dnaX	DNA polymerase III subunit gamma
	?	NC_002947	= 4854943	69 (0.970)					coding (203/2076 nt)	dnaX	DNA polymerase III subunit gamma

ATGTGCACTTCGTCGATCAGGTAGACCTTGAAGCGCCCACGGCTAGGGGCGTACTGCACGTTATCGAGCAGTTCGCGAGTGTCCTCTACCTTGGTACGGCTGGCGGCGTCGATCTCGATCAGGTCGACGAAACGGCCTTCGTCGATTTCCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4854757‑4854911 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcaTCACCTCCACGCCCTGTGGCACCTGTTCGGTGTGCCGGGAAATCGACGAAGGCCGTTTCGTCGACCTGATCGAGATCGACGCCGCCAGCCGTACCAAGGTAGAGGACACTCGCGAACTGCTCGATAACGTGCAGTACGCCCCTAGCC  <  NC_002947/4854943‑4854797                                                                                                                                                                                                                                                                                                                ATGTGCACTTCGTCGATCAGGTAGACCTTGAAGCGCCCACGGCTAGGGGCGTACTGCACGTTATCGAGCAGTTCGCGAGTGTCCTCTACCTTGGTACGGCTGGCGGCGTCGATCTCGATCAGGTCGACGAAACGGCCTTCGTCGATTTCC                                                                                                                                                          >  1:548114/1‑150   GTGCACTTCGTCGATCAGGTAGACCTTGAAGCGCCCACGGCTAGGGGCGTACTGCACGTTATCGAGCAGTTCGCGAGTGTCCTCTACCTTGGTACGGCTGGCGGCGTCGATCTCGATCAGGTCGACGAAACGGCCTTCGTCGATTTCCCG                                                                                                                                                        <  2:1377304/150‑1                     GTAGACCTTGAAGCGCCCACGGCTAGGGGCGTACTGCACGTTATCGAGCAGTTCGCGAGTGTCCTCTACCTTGGTACGGCTGGCGGCGTCGATCTCGATCAGGTCGACGAAACGGCCTTCGTCGATTTCCCGGCATCACCTCCACGCCCc                                                                                                                                      >  1:1922964/1‑149                                            TAGGGGCGTACTGCACGTTATCGAGCAGTTCGCGAGTGTCCTCTACCTTGGTACGGCTGGCGGCGTCGATCTCGATCAGGTCGACGAAACGGCCTTCGTCGATTTCCCGGCATCACCTCCACGCCCCGTGGCACCTGTTCGGTGTGCCGG                                                                                                               <  2:1922964/150‑1                                                                                TGTCCTCTACCTTGGTACGGCTGGCGGCGTCGATCTCGATCAGGTCGACGAAACGGCCTTCGTCGATTTCCCGGCATCACCTCCACGCCCTGTGGCACCTGTTCGGTGTGCCGGGA                                                                                                             >  1:1157988/1‑116                                                                                TGTCCTCTACCTTGGTACGGCTGGCGGCGTCGATCTCGATCAGGTCGACGAAACGGCCTTCGTCGATTTCCCGGCATCACCTCCACGCCCTGTGGCACCTGTTCGGTGTGCCGGGA                                                                                                             <  2:1157988/116‑1                                                                                                                                                         GCATCACCTCCACGCCCTGTGGCACCTGTTCGGTGTGCCGGGAAATCGACGAAGGCCGTTTCGTCGACCTGATCGAGATCGACGCCGCCAGCCGTACCAAGGTAGAGGACACTCGCGAACTGCTCGATAACGTGCAGTACGCCCCTAGCC  >  1:571910/1‑150                                                                                                                                                                                                                                                                                                                ATGTGCACTTCGTCGATCAGGTAGACCTTGAAGCGCCCACGGCTAGGGGCGTACTGCACGTTATCGAGCAGTTCGCGAGTGTCCTCTACCTTGGTACGGCTGGCGGCGTCGATCTCGATCAGGTCGACGAAACGGCCTTCGTCGATTTCCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4854757‑4854911 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcaTCACCTCCACGCCCTGTGGCACCTGTTCGGTGTGCCGGGAAATCGACGAAGGCCGTTTCGTCGACCTGATCGAGATCGACGCCGCCAGCCGTACCAAGGTAGAGGACACTCGCGAACTGCTCGATAACGTGCAGTACGCCCCTAGCC  <  NC_002947/4854943‑4854797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.