| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4856141 = | 50 (0.670) | 7 (0.110) | 6/226 | NT | 11.0% | intergenic (+68/+128) | PP_4270/PP_5670 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 4856228 = | 69 (1.040) | intergenic (+155/+41) | PP_4270/PP_5670 | hypothetical protein/hypothetical protein | |||||
TGTCAGCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4856302‑4856141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGTCCT > NC_002947/4856228‑4856375 TGTCAGCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGC > 2:493091/1‑150 AGCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGC < 1:1123103/150‑1 GTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCC > 2:1894666/1‑150 gGTTTGGACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACA < 1:1574638/149‑1 GTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGC > 2:1691986/1‑130 GTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGC < 1:1691986/130‑1 AATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGC < 2:677216/79‑1 AATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGC > 1:677216/1‑79 GCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGTCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCT > 1:1893885/1‑150 GCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTAC > 2:549368/1‑130 GCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTAC < 1:549368/130‑1 CCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTT > 2:294269/1‑127 CCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTT < 1:294269/127‑1 CCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTAT > 1:146482/1‑97 CCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTAT < 2:146482/97‑1 CCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGT > 1:1298214/1‑150 cgacCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAACCTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTT < 2:1574638/146‑1 GCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTC < 2:1065760/150‑1 GCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTC < 2:650438/150‑1 GCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTC > 1:1711479/1‑150 CCCACCGCCCTGTGCCGCACCTTGACAATCTCTATCTCAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTC < 2:1051192/150‑1 CCCACAGCATTGTGCGGCACATTCACAATCTAAATTGCAAGCTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTC < 2:1893885/150‑1 CCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCG > 2:160282/1‑150 CACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGT > 1:147921/1‑150 CACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCCAGTTCCTGCAGCCGGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGT > 1:1278218/1‑150 ACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGC > 2:1451732/1‑111 ACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGC < 1:1451732/111‑1 AGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGTCCT < 1:908642/150‑1 AGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGTCCT > 1:467884/1‑150 AGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCCCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGTCCT < 1:1750541/150‑1 TGTCAGCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4856302‑4856141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGTCCT > NC_002947/4856228‑4856375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |