| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4856154 | 57 (0.760) | 6 (0.090) | 3/226 | NT | 9.1% | intergenic (+81/+115) | PP_4270/PP_5670 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 4856213 | 69 (1.040) | intergenic (+140/+56) | PP_4270/PP_5670 | hypothetical protein/hypothetical protein | |||||
AGCGACGGGCGACCCGGACAGTATGTCTGTGGCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4855992‑4856154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTT < NC_002947/4856213‑4856068 AGCGACGGGCGACCCGGACAGTATGTCTGTGGCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCC > 2:1738858/1‑150 GACGGGCGACCCGGACAGTATGTCTGTGGCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGT < 2:95199/150‑1 GCGACCCGGACAGTATGTCTGAGGGCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCTGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCCAAAAGCTGGCGCGATCCCTGTGGGAG < 2:963936/150‑1 CGACCCGGACAGTATGTCTGTGGCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGC > 2:671206/1‑150 ACCCGGACAGTATGTCTGTGGCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGG < 1:230489/150‑1 CCCGGACAGTATGTGTGTGGCCCGGCCCGAAATACCCAGCAAAATGCCGGAACACTGCCCGCGCAAATACCGCCCCCGCTCATTTCGCGACCGCTTGCGCAACTGGCTTGCTTAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGG < 2:689446/150‑1 GCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTATCGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGG < 2:944624/124‑1 GCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGG > 1:944624/1‑124 CCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGG > 1:569122/1‑117 CCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGG < 2:569122/117‑1 AGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGG < 1:813018/112‑1 AGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGG > 2:813018/1‑112 GCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGC < 1:1092374/150‑1 GCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGC < 1:1092615/150‑1 CGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGG > 1:617883/1‑119 CGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGG < 2:617883/119‑1 GCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTG < 2:14818/50‑1 GCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTG > 1:14818/1‑50 TCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAG < 1:1911938/100‑1 TCAATTTCTAAAAGATGGCGCGATCCCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAG > 2:1911938/1‑100 TGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAG < 2:1813578/113‑1 TGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAG > 1:1813578/1‑113 GGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGT < 1:516595/150‑1 GGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTT < 2:1827997/150‑1 GGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTT < 2:854527/150‑1 GGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTC < 2:393064/125‑1 GGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTC > 1:393064/1‑125 AGCGACGGGCGACCCGGACAGTATGTCTGTGGCCCGGCCCGAAATACCCAGCAAAATGCCGGCACACAGCCAGCGCAACTAACGGCCCTGCTCATTTCGCGACCGCTTGCGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4855992‑4856154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGATCGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCGCAAGCGGTCGCGAAATGAGCAGGGCCGTTAGTT < NC_002947/4856213‑4856068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |