| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4879466 | 71 (0.950) | 4 (0.060) | 4/242 | NT | 5.6% | coding (31/1341 nt) | PP_4289 | membrane protein |
| ? | NC_002947 | = 4879479 | 66 (0.930) | coding (44/1341 nt) | PP_4289 | membrane protein | |||||
CAGTGGTTCTGGCAACAACTGCGATGAGCATTACTTCACCGAGGAACAGATGCTGATCCTCAATCCCCACCAATAAGAAAAGGTCAGTCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCTGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4879316‑4879466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaccCAGCGAATGCTCAGGTTCAGCCATTCGTGAAGGTGTGCTTCCACAGTATGTACCTCTGCCAGTCACCGAGAAGATGACTGACCTTTTCTTATTGGTGGGGATTGAGGATCAGCATCTGTTCCTCGGTGAAGTAATGCTCATCGCAGTTG < NC_002947/4879479‑4879331 CAGTGGTTCTGGCAACAACTGCGATGAGCATTACTTCACCGAGGAACAGATGCTGATCCTCAATCCCCACCAATAAGAAAAGGTCAGTCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCTGAAC > 2:1179885/1‑150 CATTACTTCACCGAGGAACAGATGCTGATCCTCAATCCCCACCAATAAGAAAAGGTCAGTCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCT > 1:1123691/1‑118 CATTACTTCACCGAGGAACAGATGCTGATCCTCAATCCCCACCAATAAGAAAAGGTCAGTCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCT > 1:1490250/1‑118 CATTACTTCACCGAGGAACAGATGCTGATCCTCAATCCCCACCAATAAGAAAAGGTCAGTCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCT < 2:1123691/118‑1 CATTACTTCACCGAGGAACAGATGCTGATCCTCAATCCCCACCAATAAGAAAAGGTCAGTCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCT < 2:1490250/118‑1 TTCACCGAGGAACAGATGCTGATCCTCAATCCCCACCAATAAGAAAAGGTCAGTCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCT > 1:1334395/1‑112 TTCACCGAGGAACAGATGCTGATCCTCAATCCCCACCAATAAGAAAAGGTCAGTCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCT < 2:1334395/112‑1 TCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCTGAACCCAGCGAATGCTCAGGT < 1:307613/80‑1 TCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCTGAACCCAGCGAATGCTCAGGT > 2:307613/1‑80 ATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCTGAACCCAGCGAATGCTCAGGTTCAG > 1:1866337/1‑82 ATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCTGAACCCAGCGAATGCTCAGGTTCAG < 2:1866337/82‑1 CCAGCGAATGCTCAGGTTCAGCCATTCGTGAAGGTGTGCTTCCACAGTATGTACCTCTGCCAGTCACCGAGAAGATGACTGACCTTTTCTTATTGGTGGGGATTGAGGATCAGCATCTGTTCCTCGGTGAAGTAATGCTCATCGCAGTTG > 2:1891544/1‑150 CCAGCGAATGCTCAGGTTCAGCCATTCGTGAAGGTGTGCTTCCACAGTATGTACCTCTGCCAGTCACCGAGAAGATGACTGACCTTTTCTTATTGGTGCTGGTTGAGGATCAGCATCTGTTCCTCGGTGAAGTAATGCTCATCGCAGTTG > 1:117055/1‑150 CAGTGGTTCTGGCAACAACTGCGATGAGCATTACTTCACCGAGGAACAGATGCTGATCCTCAATCCCCACCAATAAGAAAAGGTCAGTCATCTTCTCGGTGACTGGCAGAGGTACATACTGTGGAAGCACACCTTCACGAATGGCTGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4879316‑4879466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaccCAGCGAATGCTCAGGTTCAGCCATTCGTGAAGGTGTGCTTCCACAGTATGTACCTCTGCCAGTCACCGAGAAGATGACTGACCTTTTCTTATTGGTGGGGATTGAGGATCAGCATCTGTTCCTCGGTGAAGTAATGCTCATCGCAGTTG < NC_002947/4879479‑4879331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |