New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4994034 =	87 (1.170)	6 (0.080)	4/242	NT	6.9%	coding (670/1020 nt)	bkdAB	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta
	?	NC_002947	4994060 =	80 (1.130)					coding (696/1020 nt)	bkdAB	branched‑chain alpha‑keto acid dehydrogenase complex subunit beta

CACCACGCAACGGCCGGTCTTTTTCACCGACTCGACGATAGTGTCCAGGTCCAGCGGCCACAGGCTGCGCAGGTCGATCACTTCGGCATCGACGCCGCTTTCTTCGGCGGCCACCTGGGCCACGTACACCGTGGTGCCGTAGGTCAGCACGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4994186‑4994034 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggtGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCTGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGTCGGTGAAAAAGACCGGCCGTTGCGTGGTGGTGCACGAGGCCACCCGCACC  >  NC_002947/4994060‑4994207                                                                                                                                                                                                                                                                                                               CACCACGCAACGGCCGGTCTTTTTCACCGACTCGACGATAGTGTCCAGGTCCAGCGGCCACAGGCTGCGCAGGTCGATCACTTCGGCATCGACGCCGCTTTCTTCGGCGGCCACCTGGGCCACGTACACCGTGGTGCCGTAGGTCAGCAC                                                                                                                                                         >  2:827664/1‑150   CCACGCAACGGCCGGTCTTTTTCACCGACTCGACGATAGTGTCCAGGTCCAGCGGCCACAGGCTGCGCAGGTCGATCACTTCGGCATCGACGCCGCTTTCTTCGGCGGCCACCTGGGCCACGTACACCGTGGTGCCGTAGGTCAGCACGG                                                                                                                                                       >  2:1106623/1‑150    CACGCAACGGCCGGTCTTTTTCACCGACTCGACGATAGTGTCCAGGTCCAGCGGCCACAGGCTGCGCAGGTCGATCACTTCGGCATCGACGCCGCTTTCTTCGGCGGCCACCTGGGCCACGTACACCGTGGTGCCGTAGGTCAGCACGGT                                                                                                                                                      >  1:244677/1‑150                                                                                                                           CGTACACCGTGGTGCCGTAGGTCAGCACGGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAA                                                                                                        >  1:773265/1‑77                                                                                                                           CGTACACCGTGGTGCCGTAGGTCAGCACGGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAA                                                                                                        <  2:773265/77‑1                                                                                                                                ACCGTGGTGCCGTAGGTCAGCACGGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCTGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGTCGGTGAAAAAGACCGGCCGTTGCGTG                          >  2:299584/1‑150                                                                                                                                ACCGTGGTGCCGTAGGTCAGCACGGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCTGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGTCGGTGAAAAAGACCGGCCGTTGCGTG                          >  2:753417/1‑150                                                                                                                                ACCGTGGTGCCGTAGGTCAGCACGGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGA                                                                                                               <  1:168384/65‑1                                                                                                                                ACCGTGGTGCCGTAGGTCAGCACGGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGA                                                                                                               >  2:168384/1‑65                                                                                                                                                    CACGGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCTGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGTCGGTGAAAAAGACCGGCCGTTGCGTGGTGGTGCACGAGGCCACCCG      >  1:72828/1‑150                                                                                                                                                    CACGGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCTGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGTCGGTGAAAAAGACCGGCCGTTGCGTGGTGGTGCACGAGGCCACCCG      <  1:772600/150‑1                                                                                                                                                    CACGGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCAGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGCCGGTGAAAAAGACCGGCCGTTGCGTGGTGCTGCACGAGGCCACCCG      >  2:1237150/1‑150                                                                                                                                                       GGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCTGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGTCGGTGAAAAAGACCGGCCGTTGCGTGGTGGTGCACGAGGCCACCCGCAC   <  1:1735183/150‑1                                                                                                                                                       GGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCTGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGTCGGTGAAAAAGACCGGCCGTTGCGTGGTGGTGCACGAGGCCACCCGCAC   <  2:1217917/150‑1                                                                                                                                                       GGTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCTGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGTCGGTGAAAAAGACCGGCCGTTGCGTGGTGGTGCACGAGGCCACCCGCAC   >  2:1527515/1‑150                                                                                                                                                        GTGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCTGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGTCGGTGAAAAAGACCGGCCGTTGCGTGGTGGTGCACGAGGCCACCCGCACC  >  2:1282861/1‑150                                                                                                                                                                                                                                                                                                               CACCACGCAACGGCCGGTCTTTTTCACCGACTCGACGATAGTGTCCAGGTCCAGCGGCCACAGGCTGCGCAGGTCGATCACTTCGGCATCGACGCCGCTTTCTTCGGCGGCCACCTGGGCCACGTACACCGTGGTGCCGTAGGTCAGCACGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4994186‑4994034 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggtGTACGTGGCCCAGGTGGCCGCCGAAGAAAGCGGCGTCGATGCCGAAGTGATCGACCTGCGCAGCCTGTGGCCGCTGGACCTGGACACTATCGTCGAGTCGGTGAAAAAGACCGGCCGTTGCGTGGTGGTGCACGAGGCCACCCGCACC  >  NC_002947/4994060‑4994207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.