New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5246704	67 (0.900)	4 (0.060)	4/246	NT	5.9%	coding (2005/3303 nt)	PP_4623	hypothetical protein
	?	NC_002947	= 5246740	63 (0.870)					coding (1969/3303 nt)	PP_4623	hypothetical protein

GGAGAAATTGTAATACGTGGGATAACCTTTGATGACAGTCTGTGTCAGTGTGCGAATGGCATCCTCTTCCAGCGTTATCAATACCTGATCCGGGTTGATTGGGCCGCCGCGATTGCCCGGGTATGAATTGATCTTTTCCGTCACCTGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5246555‑5246704 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgCTGATGAAGGTGCCGAGCTTTCGCACCTTCGCCCATCGACAGGTGACGGAAAAGATCAATTCATACCCGGGCAATCGCGGCGGCCCAATCAACCCGGATCAGGTATTGATAACGCTGGAAGAGGATGCCATTCGCACACTGACACAGA  <  NC_002947/5246740‑5246593                                                                                                                                                                                                                                                                                                            GGAGAAATTGTAATACGTGGGATAACCTTTGATGACAGTCTGTGTCAGTGTGCGAATGGCATCCTCTTCCAGCGTTATCAATACCTGATCCGGGTTGATTGGGCCGCCGCGATTGCCCGGGTATGAATTGATCTTTTCCGTCACCTGTCG                                                                                                                                                      >  1:645948/1‑150                                                                       AGCGTTATCAATACCTGATCCGGGTTGATTGGGCCGCCGCGATTGCCCGGGTATGAATTGATCTTTTCCGTCACCTGTCGCTGATGAAGGTGCCGAGCTTTCGCACCTTCGCCCATCGACAG                                                                                                            <  1:114100/122‑1                                                                       AGCGTTATCAATACCTGATCCGGGTTGATTGGGCCGCCGCGATTGCCCGGGTATGAATTGATCTTTTCCGTCACCTGTCGCTGATGAAGGTGCCGAGCTTTCGCACCTTCGCCCATCGACAG                                                                                                            >  2:114100/1‑122                                                                                 ATACCTGATCCGGGTTGATTGGGCCGCCGCGATTGCCCGGGTATGAATTGATCTTTTCCGTCACCTGTCGCTGATGAAGGTGCCGAGCTTTCGCACCTTCGCCCATCGACAGG                                                                                                           >  1:391466/1‑113                                                                                 ATACCTGATCCGGGTTGATTGGGCCGCCGCGATTGCCCGGGTATGAATTGATCTTTTCCGTCACCTGTCGCTGATGAAGGTGCCGAGCTTTCGCACCTTCGCCCATCGACAGG                                                                                                           <  2:391466/113‑1                                                                                                                                                     CGCTGATGAAGGTGCCGAGCTTTCGCACCTTCGCCCATCGACAGGTGACGGAAAAGATCAATTCATACCCGGGCAATCGCGGCGGCCCAATCAACCCGGATCAGGTATTGATAACGCTGGAAGAGGATGCCATTCGCACACTGACACAGA  <  2:54794/150‑1                                                                                                                                                     CGCTGATGAAGGTGCCGAGCTTTCGCACCTTCGCCCATCGACAGGTGACGGAAAAGATCAATTCATACCCGGGCAATCGCGGCGGCCCAATCAACCCGGATCAGGTATTGATAACGCTGGAAGAGGATGCCATTCGCACACTGACACAGA  <  2:991103/150‑1                                                                                                                                                                                                                                                                                                            GGAGAAATTGTAATACGTGGGATAACCTTTGATGACAGTCTGTGTCAGTGTGCGAATGGCATCCTCTTCCAGCGTTATCAATACCTGATCCGGGTTGATTGGGCCGCCGCGATTGCCCGGGTATGAATTGATCTTTTCCGTCACCTGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5246555‑5246704 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgCTGATGAAGGTGCCGAGCTTTCGCACCTTCGCCCATCGACAGGTGACGGAAAAGATCAATTCATACCCGGGCAATCGCGGCGGCCCAATCAACCCGGATCAGGTATTGATAACGCTGGAAGAGGATGCCATTCGCACACTGACACAGA  <  NC_002947/5246740‑5246593

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.