| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5537763 | 66 (0.880) | 7 (0.100) | 7/240 | NT | 10.2% | intergenic (‑140/‑208) | PP_4870/PP_4871 | azurin/lysine decarboxylase family protein |
| ? | NC_002947 | = 5537768 | 61 (0.870) | intergenic (‑145/‑203) | PP_4870/PP_4871 | azurin/lysine decarboxylase family protein | |||||
AGCTTTCGCAAACATCATGAATCTCCTTGGCAGGGTTTTATCAATTGCGAGACTGCCTGAAACCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAAGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5537609‑5537763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagggcaTGAT‑GTGCCCTTAGATTTGTTGTATACAATCCATTGAACAATTCTACTGGCTGGCCTCTTGACGCCCCCTTGACCCATATCAGCAAGGGGCTGAACGGTTTCAGGCAGTCTCGCAATTGATAAAACCCTGCCAAGGAGATTCATGAT < NC_002947/5537768‑5537622 AGCTTTCGCAAACATCATGAATCTCCTTGGCAGGGTTTTATCAATTGCGAGACTGCCTGAAACCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAA < 1:1592229/150‑1AGCTTTCGCAAACATCATGAATCTCCTTGGCAGGGTTTTATCAATTGCGAGACTGCCTGAAACCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAA < 2:146308/150‑1 TTTCGCAAACATCATGAATCTCCTTGGCAGGGTTTTATCAATTGCGAGACTGCCTGAACCCGTTAAGACACTTGCTGATATCTGTCAATGGGGCGTCAATAGGGTAGCCAGGAGAAGTGTTCAATGGATTGTATACAACAAATCTAAGGG < 2:1655489/150‑1 TTTCGCAAACATCATGAATCTCCTTGGCAGGGTTTTATCAATTGCGAGACTGCCTGAAACCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAAGGG > 1:261265/1‑150 TTTCGCAAACATCATGAATCTCCTTGGCAGGGTTTTATCAATTGCGAGACTGCCTGAAACCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAAGGG > 2:1660222/1‑150 TGAATCTCCTTGACAGGGTTTTATCAATTGCGAGACTGCCTGAAACCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAAGGGCATGAT‑GTGCCCTT > 2:937277/1‑150 TCTCCTTGGCAGGGTTTCATCAATTGCGAGACTGCCTGAAACCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAAGGGCATGAT‑GTGCCCTTAGAT < 1:1302885/150‑1 CTTGGCAGGGTTTTATCAATTGCGAGACTGCCTGAAACCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAAGGGCATGAT‑GTGCCCTTA > 1:915926/1‑143 CTTGGCAGGGTTTTATCAATTGCGAGACTGCCTGAAACCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAAGGGCATGAT‑GTGCCCTTA < 2:915926/143‑1 CCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAAG < 1:895514/89‑1 CCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAAG > 2:895514/1‑89 TTCAATGGATTGTATACAACAAATCTAAGGGCA‑CATCATGCCCTTAGATTTGTTGTATACAATCCATTGAACAATTCTACTGGCTGGCCTCTTGACGCCCCCTTGACCCATATCAGCAAGGGGCTGAACGGTTT > 1:204127/1‑134 TTCAATGGATTGTATACAACAAATCTAAGGGCA‑CATCATGCCCTTAGATTTGTTGTATACAATCCATTGAACAATTCTACTGGCTGGCCTCTTGACGCCCCCTTGACCCATATCAGCAAGGGGCTGAACGGTTT < 2:204127/134‑1 ATTGTATACAACAAATCTAAGGGCA‑CATCATGCCCTTAGATTTGTTGTATACAATCCATTGAACAATTCTACTGGCTGGCCTCTTGACGCCCCCTTGACCCATATCAGCAAGGGGCTGAACGGTTTCAGGCAGTCTCGCAATTGATAAAA > 1:937277/1‑150 AGGGCATGAT‑GTGCCCTTAGATTTGTTGTATACAATCCATTGAACAATTCTACTGGCTGGCCTCTTGACGCCCCCTTGACCCATATCAGCAAGGGGCTGAACGGTTTCAGGCAGTCTCGCAATTGATAAAA > 2:1131061/1‑131 AGGGCATGAT‑GTGCCCTTAGATTTGTTGTATACAATCCATTGAACAATTCTACTGGCTGGCCTCTTGACGCCCCCTTGACCCATATCAGCAAGGGGCTGAACGGTTTCAGGCAGTCTCGCAATTGATAAAA < 1:1131061/131‑1 GGCATGAT‑GTGCCCTTAGATTTGTTGTATACAATCCATTGAACAATTCTACTGGCTGGCCTCTTGACGCCCCCTTGACCCATATCAGCAAGGGGCTGAACGGTTTCAGGCAGTCTCGCAATTGATAAAACCCTGCCAAGGAGATTCATGA < 1:1118770/150‑1 GCATGAT‑GGGCCCGTAGATTTGTTGTATACAATCCATTGAACAATTCTACTGGCTGGCCTCTTGACGCCCCCTTGACCCATATCAGCAAGGGGCTTAACGGTTTCAGGCAGTCTCGCAATTGATAACACCCTGCCAAGGAGATTCATGAT < 2:169957/150‑1 AGCTTTCGCAAACATCATGAATCTCCTTGGCAGGGTTTTATCAATTGCGAGACTGCCTGAAACCGTTCAGCCCCTTGCTGATATGGGTCAAGGGGGCGTCAAGAGGCCAGCCAGTAGAATTGTTCAATGGATTGTATACAACAAATCTAAGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5537609‑5537763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagggcaTGAT‑GTGCCCTTAGATTTGTTGTATACAATCCATTGAACAATTCTACTGGCTGGCCTCTTGACGCCCCCTTGACCCATATCAGCAAGGGGCTGAACGGTTTCAGGCAGTCTCGCAATTGATAAAACCCTGCCAAGGAGATTCATGAT < NC_002947/5537768‑5537622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |