| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5698799 | 36 (0.480) | 9 (0.140) | 8/220 | NT | 20.9% | intergenic (+33/‑134) | hslU/PP_5002 | protease HslVU ATPase subunit/hypothetical protein |
| ? | NC_002947 | = 5698848 | 37 (0.570) | intergenic (+82/‑85) | hslU/PP_5002 | protease HslVU ATPase subunit/hypothetical protein | |||||
AGAAGTGTCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5698634‑5698799‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaagcccgcCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAACTGTCGAAACCGGTCTTACAGAATGTAACGCGACAGGTCTTCGTTCTGTGCCAGCTCACCCAGGTGGCTGTTCACATAC < NC_002947/5698848‑5698703 AGAAGTGTCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTT < 1:439498/150‑1 GTGTCGCCCAGCGCGGGCGACCTGGCCAGCACCCCTGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCCGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGC < 2:986853/150‑1 TGTCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCG < 1:1540797/150‑1 TGTCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCG < 2:710971/150‑1 TCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGG > 1:309366/1‑150 CCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAG > 2:1544725/1‑150 GATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAGGCCCAAGGGTTGTGGTGGCGC < 1:1898696/150‑1 GATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGC < 1:1544725/150‑1 ACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCA > 1:187697/1‑150 ATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGC < 2:187697/150‑1 ACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGC > 1:1781873/1‑134 ACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGC < 2:1781873/134‑1 CTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTT > 1:539369/1‑111 CTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTT < 2:539369/111‑1 CGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAA > 2:228520/1‑42 CGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAA < 1:228520/42‑1 TTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAACTGTCGAAACCGGTCTTACAGAATGTAACGCGACAGGTCTTCGTTCTGTGCCAGCTCACCCAGGTG > 1:89320/1‑150 TTCGCGGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAACTGTCGAAACCGGTCTTACAGAATGTAACGCGACAGGTCTTCGTTCTGTGCCAGCTCACCCAGGTG > 2:1398629/1‑150 GGGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAACTGTCGAAACCGGTCTTACAGAATGTAACGCGACAGGTCTTCGTTCTGTGCCAGCTCACCCAGGTGGCTGT < 1:1632066/150‑1 GGCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAACTGTCGAAACCGGTCTTACAGAATGTAACGCGACAGGTCTTCGTTCTGTGCCAGCTCACCCAGGTGGCTGTT < 2:982456/150‑1 GCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAACTGTCGAAACCGGTCTTACAGAATGTAACGCGACAGGTCTTCGTTCTGTGCCAGCTCACCCAGGTGGCTGTTC < 1:1203228/150‑1 CAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAACTGTCGAAACCGGTCTTACAGAATGTAACGCGACAGGTCTTCGTTCTGTGCCAGCTCACCCAGGTGGCTGTTCA < 1:69131/150‑1 AAGCCCGCCCCCGCACGGATCACCACAGGCCGAAGGGTTGTGGTGGCGCGTGCAGGAGCGAGCTTGCCCGCGAAACTGTCGAAACCGGTCTTACAGAATGTAACGCGACTGGTCTTCGTTCTGTGCCAGCTCACCCAGGTGGCTGTTCAC > 1:1118838/1‑150 CCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAACTGTCGAAACCGGTCTTACAGAATGTAACGCGACAGGTCTTCGTTCTGTGCCAGCTCACCCAGGTGGCTGTTCACATAC > 1:304814/1‑150 AGAAGTGTCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5698634‑5698799‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaagcccgcCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGGAGCGGGCTTGCCCGCGAAACTGTCGAAACCGGTCTTACAGAATGTAACGCGACAGGTCTTCGTTCTGTGCCAGCTCACCCAGGTGGCTGTTCACATAC < NC_002947/5698848‑5698703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |