| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5751776 = | 78 (1.050) | 8 (0.110) | 9/244 | NT | 10.5% | intergenic (‑158/‑313) | thiI/glnA | tRNA sulfurtransferase/glutamine synthetase |
| ? | NC_002947 | 5751802 = | 61 (0.850) | intergenic (‑184/‑287) | thiI/glnA | tRNA sulfurtransferase/glutamine synthetase | |||||
GTTGGGTTAGCGGGTGAAAGTGCACCCTTACGATGCGTTTTTTGATCGTGTCGCACCAATAGGGTGCGTGGCGTGAGTGGTGTGCCAGGTTCTAGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5751920‑5751776‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGCCCCCTTTTATC > NC_002947/5751802‑5751950 GTTGGGTTAGCGGGTGAAAGTGCACCCTTACGATGCGTTTTTTGATCGTGTCGCACCAATAGGGTGCGTGGCGTGAGTGGTGTGCCAGGTTCTAGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGG < 1:1231680/150‑1GTTGGGTTAGCGGGTGAAAGTGCACCCTTACGATGCGTTTTTTGATCGTGTCGCACCAATAGGGTGCGTGGCGTGAGTGGTGTGCCAGGTTCTAGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGG < 1:248052/150‑1 TTGGGTTAGCGGGTGAAAGTGCACCCTTACGATGCGTTTTTTGATCGTGTCGCACCAATAGGGTGCGTGGCGTGAGTGGTGTGCCAGGTTCTAGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGCGGTGCAAAGCCCGTAGGAGCGGG < 1:756349/150‑1 ACCCTTACGATGCGTTTTTTGATCGTGTCGCACCAATAGGGTGCGTGGCGCGAGTGGTCTGCCAGGTTC‑CGGCCCT‑TTCGCGGGTAAACCCGCACCTACAGGCGGTGCAAAGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAA < 1:977396/150‑1 TCCTACGGGCTTTGCACCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGA > 1:300352/1‑96 TCCTACGGGCTTTGCACCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGA < 2:300352/96‑1 CTACGGGCTTTGCACCGCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAA < 2:756349/150‑1 TACGGGCTTTGCACCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGC < 1:1497711/91‑1 TACGGGCTTTGCACCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGC > 2:1497711/1‑91 GCACCGCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAAC < 2:1231680/150‑1 GAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGCCCCCTTTTATC < 1:169759/150‑1 GAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGCCCCCTTTTATC < 1:821579/150‑1 GAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGCCCCCTTTTATC < 2:378451/150‑1 GTTGGGTTAGCGGGTGAAAGTGCACCCTTACGATGCGTTTTTTGATCGTGTCGCACCAATAGGGTGCGTGGCGTGAGTGGTGTGCCAGGTTCTAGGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCTTTGCACCGCCTGTAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5751920‑5751776‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggAGCGGGTTTACCCGCGAAGAGGCCCTAGAACCTGGCACACCACTCACGCCACGCACCCTATTGGTGCGACACGATCAAAAAACGCATCGTAAGGGTGCACTTTCACCCGCTAACCCAACGCCAAATGCACGCAAACGCCCCCTTTTATC > NC_002947/5751802‑5751950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |