New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5825655	78 (1.050)	4 (0.060)	4/234	NT	5.2%	coding (696/813 nt)	thiG	thiazole synthase
	?	NC_002947	= 5825678	75 (1.090)					coding (673/813 nt)	thiG	thiazole synthase

GGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5825499‑5825655 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcggccatcGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGAGCAAC  <  NC_002947/5825678‑5825531                                                                                                                                                                                                                                                                                                                   GGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATACAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTC                                                                                                                                                             <  2:1178938/150‑1        GGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGCCCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATC                                                                                                                                                      <  1:1188891/150‑1                         AGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCGCCCACGCCCAGCAGCC                                                                                                                                     >  2:203048/1‑150                                            TTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCAT                                                                                                                                                       >  1:1883264/1‑113                                            TTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCAT                                                                                                                                                       <  2:1883264/113‑1                                              GATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCAT                                                                                                                <  1:203048/150‑1                                                                               ATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGA                                                                                                                      <  1:972635/111‑1                                                                               ATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGA                                                                                                                      >  2:972635/1‑111                                                                                                                                                     tcgttCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAA         >  1:66235/6‑150                                                                                                                                                      CGGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTCGCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAG        <  2:1809154/150‑1                                                                                                                                                       GGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGA       <  2:1527572/150‑1                                                                                                                                                       GGCCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGA       <  2:1564644/150‑1                                                                                                                                                         CCATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGAGC     >  2:1230676/1‑150                                                                                                                                                          CATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGAGCA    >  2:810342/1‑150                                                                                                                                                           ATCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCACTGGATGGTCTGATCAAGTAAGAGCAA   <  2:1150357/150‑1                                                                                                                                                            TCGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGAGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGAGCAAC  <  2:507631/150‑1                                                                                                                                                                                                                                                                                                                   GGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5825499‑5825655 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcggccatcGCCCACGCCCAGCAGCCAGTGCTGATGGCCGAGGCCATGAAACACGCCATTGTCGCGGGTCGCATGGCCTACCTGGCTGGTCGTATGCCGAAGAAACTCTATGCCAGCGCCTCCTCGCCGCTGGATGGTCTGATCAAGTAAGAGCAAC  <  NC_002947/5825678‑5825531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.