| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5927981 = | 71 (0.950) | 6 (0.090) | 5/236 | NT | 8.4% | intergenic (‑31/+122) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| ? | NC_002947 | 5928026 = | 65 (0.940) | intergenic (‑76/+77) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein | |||||
ATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5928135‑5927981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccgcgcaAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAAT > NC_002947/5928026‑5928174 ATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACC < 1:1657708/150‑1ATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACC < 1:471722/150‑1ATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGCTTTACCCGCGAACGACC > 1:1131610/1‑150 TTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACCG > 1:1315116/1‑150 TGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACCGCGCAGGGCAGTGCAGATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCA > 1:587349/1‑150 TGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACCGCGCAGGGCAGTGCAGATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCA > 1:587512/1‑150 CTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAG > 1:781154/1‑134 CTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAG < 2:781154/134‑1 TGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGG < 1:968916/72‑1 TGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGG > 2:968916/1‑72 CGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTCTAGCCAGCCCGAT > 1:1703553/1‑103 CGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTCTAGCCAGCCCGAT < 2:1703553/103‑1 AAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAAT > 2:1286244/1‑150 ATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAACGACCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5928135‑5927981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccgcgcaAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAAT > NC_002947/5928026‑5928174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |