| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5999369 = | 87 (1.170) | 6 (0.090) | 4/224 | NT | 8.2% | intergenic (‑168/‑153) | ycaC‑IV/PP_5256 | putative hydrolase/cyclic nucleotide‑binding protein |
| ? | NC_002947 | 5999429 = | 57 (0.870) | intergenic (‑228/‑93) | ycaC‑IV/PP_5256 | putative hydrolase/cyclic nucleotide‑binding protein | |||||
AACGCCAGCATGGTGATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTAATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5999532‑5999369‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggaacgggcAAG‑TCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCC > NC_002947/5999429‑5999566 AACGCCAGCATGGTGATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTAATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCC > 2:762097/1‑150 ACGCCAGCATGGTGATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTGATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCC > 2:339639/1‑150 GCCAGCATGGTGATCTCGGGGGTGGGGGGAGGGCTAGGGGAAGTAATAGAGCAGGATTGCCAGGCAGGGAATGAAAGCCTGGGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCACTGGCTCTGAATCCTGCGCGATCCCTG > 2:112897/1‑150 AGCATGGTGATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTAATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGG < 2:1831810/150‑1 AGCATGGTGATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTAATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGG < 2:1252699/150‑1 TGGTGATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTAATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAAC < 1:378272/150‑1 GGTGATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTAATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACG > 2:931930/1‑150 GTGATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTAATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGG < 1:1307382/150‑1 GTGATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTAATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGG < 1:1895261/150‑1 GATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTAATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGC < 1:1298762/150‑1 TGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCGTGCCCGCGAAGAGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCT > 1:1100987/1‑150 GTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCAAG‑TCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCCCCCCTCACCCCCGAGATCACCA > 1:305509/1‑150 GTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCAAG‑TCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCCCCCCTCACCCCCGAGATCACCA > 1:304277/1‑150 CACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCAAG‑TCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGAACAACATTCTc > 1:886826/1‑149 GGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCAAG‑TCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCCCCCCTCACCCCCGAGATCACCATGCTGGCGT < 2:304277/150‑1 GGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGCAAG‑TCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCCCCCCTCACCCCCGAGATCACCATGCTGGCGT < 2:305509/150‑1 CCTGTGGGAACGGGCAAG‑TCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCCCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGC > 1:293525/1‑150 CCTGTGGGAACGGGCAAG‑TCGCGAACGAGACAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGC > 1:529633/1‑150 TGTGGGAACGGGCAAG‑TCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGC < 1:950835/150‑1 GTGGGAACGGGCAAG‑TCGCGAAGGGGCCAGCACAGGCTTGCCTTGCCTGCCTGGCAAACCTGCTCTATTACTGCCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCC < 1:1562274/150‑1 AACGCCAGCATGGTGATCTCGGGGGTGAGGGGAGGGCTGTGGGTAGTAATAGAGCAGGTTTGCCAGGCAGGCAATGCAAGCCTGTGCTGGCCCCTTCGCGACTTGCCCGTTCCCACAGGTAAAGCGCTGGTTTTGAATCTTGTGCGATCCCTGTGGGAACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5999532‑5999369‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggaacgggcAAG‑TCGCGAAGGGGCCAGCACAGGCTTGCATTGCCTGCCTGGCAAACCTGCTCTATTACTACCCACAGCCCTCCCCTCACCCCCGAGATCACCATGCTGGCGTTCATCCAGTCGTCCCCGTTGTTGCTCGGTTGCGCC > NC_002947/5999429‑5999566 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |