| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6103551 = | 66 (0.880) | 4 (0.060) | 4/246 | NT | 6.2% | coding (328/855 nt) | PP_5353 | hypothetical protein |
| ? | NC_002947 | 6103622 = | 57 (0.790) | coding (399/855 nt) | PP_5353 | hypothetical protein | |||||
GATCACCGGTGCGGCTGTGGCAGCAGGTGCGGCCGAACCACCGAAAATCGACGGCTGCGCAGGCTGCGCGTGAGCCTCACGCTGCATCGGCGCATGGCCTGGCATGGCCATTTGCGGCTGCTGCTGGCGACGGCGCGCGGCGATGAAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6103700‑6103551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgTGAGGCTCACGCGCAGCCTGCGCAGCCGTCGATTTTCGGTGGTTCGGCCGCACCTGCTGCCACAGCCGCACCGGTGATCAACGCGCCGGCCTGGTTCAACGAGCAGAGCTTCCTGGCGGCAGCCCGTAACCACTTCCAGTCGCTGC > NC_002947/6103622‑6103767 GATCACCGGTGCGGCTGTGGCAGCAGGTGCGGCCGAACCACCGAAAATCGACGGCTGCGCAGGCTGCGCGTGAGCCTCACGCTGCATCGGCGCATGGCCTGGCATGGCCATTTGCGGCTGCTGCTGGCGACGGCGCGCGGCGATGAAGCG < 1:1729989/150‑1GATCACCGGTGCGGCTGTGGCAGCAGGTGCGGCCGAACCACCGAAAATCGACGGCTGCGCAGGCTGCGCGTGAGCCTCACGCTGCATCGGCGCATGGCCTGGCATGGCCATTTGCGGCTGCTGCTGGCGACGGCGCGCGGCGATGAAGCG > 1:715204/1‑150GATCACCGGTGCGGCTGTGGCAGCAGGTGCGGCCGAACCACCGAAAATCGACGGCTGCGCAGGCTGCGCGTGAGCCTCACGCTGCATCGGCGCATGGCCCGGCATGGCCATTTGCGGCTGCTGCTGGCGACGGCGCGCGGCGATGAAGCG < 2:991404/150‑1 CACGCTGCATCGGCGCATGGCCTGGCATGGCCATTTGCGGCTGCTGCTGGCGACGGCGCGCGGCGATGAAGCGTGAGGCTCACGCGCAGCCTGCGCAGCCGTCGATTTTCGGTGGTTCGGCCGCACCTGCTGCCACAGCCGCACCGGT < 1:1506428/148‑1 CACGCTGCATCGGCGCATGGCCTGGCATGGCCATTTGCGGCTGCTGCTGGCGACGGCGCGCGGCGATGAAGCGTGAGGCTCACGCGCAGCCTGCGCAGCCGTCGATTTTCGGTGGTTCGGCCGCACCTGCTGCCACAGCCGCACCGGT > 2:1506428/1‑148 TGCATCGGCGCATGGCCTGGCATGGCCATTTGCGGCTGCTGCTGGCGACGGCGCGCGGCGATGAAGCGTGAGGCTCACGCGCAGCCTGCGC > 1:250216/1‑91 TGCATCGGCGCATGGCCTGGCATGGCCATTTGCGGCTGCTGCTGGCGACGGCGCGCGGCGATGAAGCGTGAGGCTCACGCGCAGCCTGCGC < 2:250216/91‑1 AGCGTGAGGCTCACGCGCAGCCTGCGCAGCCGTCGATTCTCGGTGGTTCGGCCGCACCTGCTGCCACAGCCGCACCGGTGATCAACGCGCCGGCCTGGTTCAACGAGCAGAGCTTCCTGGCGGCAGCCCGTAACCACTTCCAGTCGCTGC > 2:1840259/1‑150 GATCACCGGTGCGGCTGTGGCAGCAGGTGCGGCCGAACCACCGAAAATCGACGGCTGCGCAGGCTGCGCGTGAGCCTCACGCTGCATCGGCGCATGGCCTGGCATGGCCATTTGCGGCTGCTGCTGGCGACGGCGCGCGGCGATGAAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6103700‑6103551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgTGAGGCTCACGCGCAGCCTGCGCAGCCGTCGATTTTCGGTGGTTCGGCCGCACCTGCTGCCACAGCCGCACCGGTGATCAACGCGCCGGCCTGGTTCAACGAGCAGAGCTTCCTGGCGGCAGCCCGTAACCACTTCCAGTCGCTGC > NC_002947/6103622‑6103767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |