| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6129411 = | 62 (0.830) | 4 (0.060) | 4/238 | NT | 6.7% | coding (306/456 nt) | PP_5377 | hypothetical protein |
| ? | NC_002947 | 6129440 = | 53 (0.760) | coding (277/456 nt) | PP_5377 | hypothetical protein | |||||
ATGGCTTCAAGGTCATTGACCATGTTGAAACCGATATGAGCGCTGTGAAACAGAGCCTTGGAGTCGCACCGCGTTTGGCTTCCTGTCACACGGCAGTGATTGATGGGAAGTTTGTCGAGGGACACGTGCCAGCTGAGCAGGTTCGTGAGCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6129565‑6129411‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctggcaCGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGGCTCTGTTTCACAGCGCTCATATCGGTTTCAACATGGTCAATGACCTTGAAGCCATTTTGCTCCAAGTGCGCGAT > NC_002947/6129440‑6129584 ATGGCTTCAAGGTCATTGACCATGTTGAAACCGATATGAGCGCTGTGAAACAGAGCCTTGGAGTCGCACCGCGTTTGGCTTCCTGTCACACGGCAGTGATTGATGGGAAGTTTGTCGAGGGACACGTGCCAGCTGAGCAGGTTCGTGAGC < 2:1262283/150‑1 TGGCTTCAAGGTCATTGATCATGTTGAAACCGATATGAGCGCTGTGAAACAGAGCCTTGGAGTCTCACCGCGTTTGGCTTCCTGTCACACGGCAGTGATTGATGGGAAGTTTGTCGAGGGACACGTGCCAGCTGAGCAGGTTCGTGAGCT < 2:926180/150‑1 TGGCTTCAAGGTCATTGACCATGTTGAAACCGATATGAGCGCTGTGAAACAGAGCCTTGGAGTCGCACCGCGTTTGGCTTCCTGTCACACGGCAGTGATTGATGGGAAGTTTGTCGAGGGACACGTGCCAGCTGAGCAGGTTCGTGAGCT < 1:1800622/150‑1 AGCGCTGTGAAACAGAGCCTTGGAGTCGCACCGCGTTTGGCTTCCTGTCACACGGCAGTGATTGATGGGAAGTTTGTCGAGGGACACGTGCCAGCTGAGCAGGTTCGTGA > 2:347037/1‑110 AGCGCTGTGAAACAGAGCCTTGGAGTCGCACCGCGTTTGGCTTCCTGTCACACGGCAGTGATTGAGGGGAAGTTTGTCGAGGGACACGTGCCAGCTGAGCAGGTTCGTGA < 1:347037/110‑1 TCGAGGGACACGTGCCAGCTGAGCAGGTTCGTGAGCTGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGGCTCTGTTTCACAGCGCTCA < 1:177645/131‑1 TCGAGGGACACGTGCCAGCTGAGCAGGTTCGTGAGCTGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGGCTCTGTTTCACAGCGCTCA > 2:177645/1‑131 ACGTGCCAGCTGAGCAGGTTCGTGAGCTGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGG > 1:1879180/1‑90 ACGTGCCAGCTGAGCAGGTTCGTGAGCTGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGG < 2:1879180/90‑1 CTGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGGCTCTGTTTCACAGCGCTCATATCGGTTTCAACATGGTCAATGACCTTGAAGCCATTTTGCTCCAAGTGCGCGA < 1:1744820/150‑1 CTGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGGCTCTGTTTCACAGCGCTCATATCGGTTTCAACATGGTCAATGACCTTGAAGCCATTTTGCTCCAAGTGCGCGA < 1:1741001/150‑1 CTGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGGCTCTGTTTCACAGCGCTCATATCGGTTTCAACATGGTCAATGACCTTGAAGCCATTTTGCTCCAAGTGCGCGA < 1:1082922/150‑1 CTGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGGCTCTGTTTCACAGCGCTCATATCGGTTTCAACATGGTCAATGACCTTGAAGCCATTTTGCTCCAAGTGCGCGA < 2:119353/150‑1 TGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGGCTCTGTTTCACAGACCTCGTATGGTTTTGAACATGGTCAATGACCTTGAAGCCATTTTGCTCCAAGTGCGCGAT > 1:1377711/1‑150 TGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGG > 2:114479/1‑76 TGGCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGG < 1:114479/76‑1 GCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAA > 2:1191848/1‑50 GCACGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAA < 1:1191848/50‑1 ATGGCTTCAAGGTCATTGACCATGTTGAAACCGATATGAGCGCTGTGAAACAGAGCCTTGGAGTCGCACCGCGTTTGGCTTCCTGTCACACGGCAGTGATTGATGGGAAGTTTGTCGAGGGACACGTGCCAGCTGAGCAGGTTCGTGAGCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6129565‑6129411‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctggcaCGTGTCCCTCGACAAACTTCCCATCAATCACTGCCGTGTGACAGGAAGCCAAACGCGGTGCGACTCCAAGGCTCTGTTTCACAGCGCTCATATCGGTTTCAACATGGTCAATGACCTTGAAGCCATTTTGCTCCAAGTGCGCGAT > NC_002947/6129440‑6129584 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |