| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6138099 = | 70 (0.940) | 5 (0.070) | 5/246 | NT | 7.2% | coding (498/1254 nt) | czcC | CzcC family metal RND transporter outer membrane protein |
| ? | NC_002947 | 6138154 = | 62 (0.860) | coding (553/1254 nt) | czcC | CzcC family metal RND transporter outer membrane protein | |||||
CGATCCAGCGTTTAAGTGCGGCGCGGGCCTGGGTGGCCTGGGTCAGCAGTTGGTCCTTCTGCTCTTCCAGTTGCGCGGCCTCCTGGCCGGGGGCCAGGGCATCGGCGGAAGCGCCGCCCCCGGCGGCCAGGCGCGCACGCACCGCCGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6138250‑6138099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGTGGCCGGTACGCGC > NC_002947/6138154‑6138302 CGATCCAGCGTTTAAGTGCGGCGCGGGCCTGGGTGGCCTGGGTCAGCAGTTGGTCCTTCTGCTCTTCCAGTTGCGCGGCCTCCTGGCCGGGGGCCAGGGCATCGGCGGAAGCGCCGCCCCCGGCGGCCAGGCGCGCACGCACCGCCGCTG > 1:1830777/1‑150 GATCCAGCGTTTAAGTGCGGCGCGGGCCTGGGTGGCCTGGGTCAGCAGTTGGTCCTTCTGCTCTTCCAGTTGCGCGGCCTCCTGGCCGGGGGCCAGGGCATCGGCGGAAGCGCCGCCCCCGGCGGCCAGGCGCGCACGCACCGCCGCTGC > 1:101848/1‑150 AGGGCATCGGCGGAAGCGCCGCCCCCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGG > 1:633689/1‑150 GGCATCGGCGGAAGCGCCGCCCCCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAAC < 1:231764/143‑1 GGCATCGGCGGAAGCGCCGCCCCCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAAC > 2:231764/1‑143 GCATCGGCGGAAGCGCCGCCCCCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGC > 1:1395886/1‑91 GCATCGGCGGAAGCGCCGCCCCCGGCGGCCAGGCGCGCACGCACCGCCGCTGCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGC < 2:1395886/91‑1 GCCCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGTGGCCGGTACGC < 1:1405362/150‑1 CCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGTGGCCGGTACGCGC > 1:129308/1‑150 CCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGTGGCCGGTACGCGC > 1:377133/1‑150 CCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGTGGCCGGTACGCGC > 1:401172/1‑150 CGATCCAGCGTTTAAGTGCGGCGCGGGCCTGGGTGGCCTGGGTCAGCAGTTGGTCCTTCTGCTCTTCCAGTTGCGCGGCCTCCTGGCCGGGGGCCAGGGCATCGGCGGAAGCGCCGCCCCCGGCGGCCAGGCGCGCACGCACCGCCGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6138250‑6138099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccCTGGCCCCCGGCCAGGAGGCCGCGCAACTGGAAGAGCAGAAGGACCAACTGCTGACCCAGGCCACCCAGGCCCGCGCCGCACTTAAACGCTGGATCGGACAGGACGCCGATGCGCAAGCGCCGGCATTTCCGCAGTGGCCGGTACGCGC > NC_002947/6138154‑6138302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |