| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6179347 | 59 (0.790) | 6 (0.080) | 6/246 | NT | 9.9% | coding (345/537 nt) | atpH | ATP synthase subunit delta |
| ? | NC_002947 | = 6179357 | 52 (0.720) | coding (335/537 nt) | atpH | ATP synthase subunit delta | |||||
AACAGAGCCATCGATTACCAGGTCACCGGCGCGGATGACGACGCCGCCAATCAGGCTGGCATCCTCCGACGCGTGCAGGCGCACTTCCTGGCCTAACCGTGCACTGAGAACCTTGGCGAGTTTGTCTTGCTGTTCTTGGTTCAACGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6179197‑6179347‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagTCACCAGTGCCTTCGCGTTGAACCAAGAACAGCAAGACAAACTCGCCAAGGTTCTCAGTGCACGGTTAGGCCAGGAAGTGCGCCTGCACGCGTCGGAGGATGCCAGCCTGATTGGCGGCGTCGTCATCCGCGCCGGTGACCTGGTAAT < NC_002947/6179357‑6179210 AACAGAGCCATCGATTACCAGGTCACCGGCGCGGATGACGACGCCGCCAATCAGGCTGGCATCCTCCGACGCGTGCAGGCGCACTTCCTGGCCTAACCGTGCACTGAGAACCTTGGCGAGTTTGTCTTGCTGTTCTTGGTTCAACGCGAA < 1:640623/150‑1AACAGAGCCATCGATTACCAGGTCACCGGCGCGGATGACGACGCCGCCAATCAGGCTGGCATCCTCCGACGCGTGCAGGCGCACTTCCTGGCCTAACCGTGCACTGAGAACCTTGGCGAGTTTGTCTTGCTGTTCTTGGTTCAACGCGAA < 2:1037939/150‑1 GCTGGCATCCTCCGACGCGTGCAGGCGCACTTCCTGGCCTAACCGTGCACTGAGAACCTTGGCGAGTTTGTCTTGCTGTTCTTGGTTCAACGCGAAGGCACTGGTGACTTCGCGTTGAACCAAGAACAGCAAGACAAACTC > 1:1711505/1‑141 GCTGGCATCCTCCGACGCGTGCAGGCGCACTTCCTGGCCTAACCGTGCACTGAGAACCTTGGCGAGTTTGTCTTGCTGTTCTTGGTTCAACGCGAAGGCACTGGTGACTTCGCGTTGAACCAAGAACAGCAAGACAAACTC < 2:1711505/141‑1 GCGTGCAGGCGCACTTCCTGGCCTAACCGTGCACTGAGAACCTTGGCGAGTTTGTCTTGCTGTTCTTGGTTCAACGCGAAGTCACCAGTGCCTTCGC < 1:720705/97‑1 GCGTGCAGGCGCACTTCCTGGCCTAACCGTGCACTGAGAACCTTGGCGAGTTTGTCTTGCTGTTCTTGGTTCAACGCGAAGTCACCAGTGCCTTCGC > 2:720705/1‑97 GTTCAACGCGAAGGCACTGGTGACTTCGCGTTGAACCAAGAACAGCAAGACAAACTCGCCAAGGTTCTCAGTGCACGGTTAGG < 1:900818/83‑1 GTTCAACGCGAAGGCACTGGTGACTTCGCGTTGAACCAAGAACAGCAAGACAAACTCGCCAAGGTTCTCAGTGCACGGTTAGG > 2:900818/1‑83 AGTCACCAGTGCCTTCGCGTTGAACCAAGAACAGCAAGACAAACTCGCCAAGGTTCTCAGTGCACGGTTAGGCCAGGAAGTGCGCCTGCACGCGTCGGAGGATGCCAGCCTGATTGGCGGCGTCGTCATCCGCGCCGGTGACCTGGTAAT < 1:1123723/150‑1 AACAGAGCCATCGATTACCAGGTCACCGGCGCGGATGACGACGCCGCCAATCAGGCTGGCATCCTCCGACGCGTGCAGGCGCACTTCCTGGCCTAACCGTGCACTGAGAACCTTGGCGAGTTTGTCTTGCTGTTCTTGGTTCAACGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6179197‑6179347‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagTCACCAGTGCCTTCGCGTTGAACCAAGAACAGCAAGACAAACTCGCCAAGGTTCTCAGTGCACGGTTAGGCCAGGAAGTGCGCCTGCACGCGTCGGAGGATGCCAGCCTGATTGGCGGCGTCGTCATCCGCGCCGGTGACCTGGTAAT < NC_002947/6179357‑6179210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |