New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 9035795 (1.270)5 (0.070) 5/230 NT 5.5% intergenic (+32/+90) PP_0079/PP_0080 transcriptional regulator/hypothetical protein
?NC_002947 = 90414 87 (1.290)intergenic (+89/+33) PP_0079/PP_0080 transcriptional regulator/hypothetical protein

Only 100 of 132 total aligned reads displayed.

GCTGGAGGGGAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCA  >  NC_002947/90208‑90505
                                                                                                                                                      |                                                                                                                                                    
     aGGGGAGTTTGCGCTCGGAACGCGACTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAg                                                                                                                                                 <  1:1503807/150‑1 (MQ=255)
      ggggAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAgg                                                                                                                                                >  1:1027877/1‑150 (MQ=255)
       gggAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGc                                                                                                                                               >  2:188621/1‑150 (MQ=255)
        ggAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGcc                                                                                                                                              <  1:236053/150‑1 (MQ=255)
        ggAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTAAGGCAGCACTA‑CGGGGTCGAGGCGATGATCGGGCCGGTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGcc                                                                                                                                              >  1:35698/1‑150 (MQ=25)
          aGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGc                                                                                                                                            <  2:568753/150‑1 (MQ=255)
            tttGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTc                                                                                                                                          <  1:378028/150‑1 (MQ=255)
                 gcTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCcaca                                                                                                                                     >  2:83349/1‑150 (MQ=255)
                  cTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAg                                                                                                                                    <  2:1256307/150‑1 (MQ=255)
                    cGGAACGCGGCTAGTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTg                                                                                                                                  <  2:1275116/150‑1 (MQ=255)
                       aaCGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCa                                                                                                                               <  2:1726093/150‑1 (MQ=255)
                          gcgGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTTGGGCCGCTTTGCGGCCCATCGCGACACAAGACCGCTCCCACAGCGGCAcgc                                                                                                                            >  2:1583518/1‑148 (MQ=255)
                           cgGCTATTCCGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGc                                                                                                                           <  2:1778563/150‑1 (MQ=255)
                              cTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGcaca                                                                                                                        <  1:746161/150‑1 (MQ=255)
                                 ttACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGc                                                                                                                     >  2:387253/1‑150 (MQ=255)
                                  tACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCACCGATCCACAAGCCCGCGCCCCCACTGCCACTGCACAcccc                                                                                                                    >  2:683441/1‑150 (MQ=255)
                                     gTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGc                                                                                                                                               >  2:611852/1‑120 (MQ=255)
                                     gTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGc                                                                                                                                               <  1:611852/120‑1 (MQ=255)
                                           ttACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCCGCCTTTAAGATTTTGATGCCCCCTTGCGCCACATCGCGACACAAGGCCGCTCCCACAGTGGCACCCCACACGCCGGCCCCtgt                                                                                                           >  2:593949/1‑150 (MQ=255)
                                           ttACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTc                                                                                                                                          <  2:1395659/119‑1 (MQ=255)
                                                 ccgcGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGc                                                                                                     >  2:1437523/1‑150 (MQ=255)
                                                 ccgcGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGc                                                                                                     <  1:1603314/150‑1 (MQ=255)
                                                       aaGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCtt                                                                                               <  2:1746373/150‑1 (MQ=255)
                                                           ggcgT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgt                                                                                           <  1:955364‑M2/150‑3 (MQ=255)
                                                             cgT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcg                                                                                         <  1:491881‑M2/150‑5 (MQ=255)
                                                               t‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcg                                                                                       >  1:1409769‑M1/1‑87 (MQ=255)
                                                                 ggggCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcga                                                                                      <  2:1409769‑M1/150‑65 (MQ=255)
                                                                 ggggCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcgcga                                                                                      >  2:380893‑M2/1‑143 (MQ=255)
                                                                   ggCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGTTTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCTCTCCCACAGTGGCACGTCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcgcgatg                                                                                    >  2:214885‑M2/1‑141 (MQ=255)
                                                                   ggCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcgcgatg                                                                                    >  1:1437523‑M2/1‑141 (MQ=255)
                                                                    gCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcgcgatgg                                                                                   <  2:1796058‑M2/150‑11 (MQ=255)
                                                                    gCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcgcgatgg                                                                                   >  1:1834606‑M2/1‑140 (MQ=255)
                                                                     cGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcgcgatggg                                                                                  >  1:443476‑M2/1‑139 (MQ=255)
                                                                     cGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcgcgatggg                                                                                  >  2:1566682‑M2/1‑139 (MQ=255)
                                                                        tGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCCTCCCGTCACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTg                                                                               >  1:229806/1‑150 (MQ=255)
                                                                          aTCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGa                                                                                                       <  1:1448002/124‑1 (MQ=255)
                                                                          aTCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGa                                                                                                       >  2:1448002/1‑124 (MQ=255)
                                                                          aTCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTgcg                                                                             >  2:1471488/1‑150 (MQ=255)
                                                                           tCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTgcgc                                                                            <  2:491881/150‑1 (MQ=255)
                                                                              aGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCgcagc                                                                         <  2:239221/150‑1 (MQ=255)
                                                                               gCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCgcagca                                                                        <  1:716377/150‑1 (MQ=255)
                                                                               gCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCgcagca                                                                        <  1:1344564/150‑1 (MQ=255)
                                                                               gCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTGGAGATTTTGGGGCAGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCgcagca                                                                        <  1:1344488/150‑1 (MQ=255)
                                                                                  gTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTc                                                                                                                                          >  1:1591293/1‑81 (MQ=255)
                                                                                  gTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTc                                                                                                                                          <  2:1591293/81‑1 (MQ=255)
                                                                                    ttGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGcccc                                                                   <  1:45315/150‑1 (MQ=255)
                                                                                      gtgGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGc                                                                                             >  2:1688577/1‑122 (MQ=255)
                                                                                      gtgGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGc                                                                                             <  1:1688577/122‑1 (MQ=255)
                                                                                       tgGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGa                                                                                                       <  2:790632/111‑1 (MQ=255)
                                                                                       tgGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGa                                                                                                       >  1:790632/1‑111 (MQ=255)
                                                                                       tgGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGc                                                                >  2:119851/1‑150 (MQ=255)
                                                                                               ttggAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGa                                                        >  1:1406320/1‑150 (MQ=255)
                                                                                               tgcaatcAGGGGCGCGGCCTTTGAGATTGTGCGGCGGGTTTGCGGCCCCTAGCGACACAAGGCCGCTCCAACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGTTGGGCTGAGCAGCAGCCCCGGCAATCTAGa                                                        <  2:660749/144‑1 (MQ=255)
                                                                                                tggAGCAGGAGCGCAGCCTTTGAGATTTTGGTGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGAc                                                       <  1:1820523/150‑1 (MQ=255)
                                                                                                  gAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCa                                                     <  1:369428/150‑1 (MQ=255)
                                                                                                      aGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTCCGCAGCAGCCCCGGCACTCCATACCACGaa                                                 <  2:73040/150‑1 (MQ=255)
                                                                                                            gcAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGCTGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGtgccg                                           >  2:686912/1‑146 (MQ=255)
                                                                                                            gcAGCCTTTGAGATTTCGGGGCCGCTTGGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGTCCACGAAGTTCAg                                           <  1:1847022/150‑1 (MQ=255)
                                                                                                               gCCTTTGAGATTTTGGAGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTg                                        >  1:629126/1‑150 (MQ=255)
                                                                                                                  tttGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTgctc                                     >  1:11005/1‑150 (MQ=255)
                                                                                                                  tttGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTgctc                                     >  1:1717653/1‑150 (MQ=255)
                                                                                                                  tttGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTCAGTCGCGAGGGGCTGCGCAACAGCCCCGGCAATCTAGACCACGAAGTTCAGGTgctc                                     >  2:349046/1‑150 (MQ=255)
                                                                                                                     gagaTTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGaa                                                 >  2:1690444/1‑135 (MQ=255)
                                                                                                                     gagaTTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGaa                                                 <  1:1690444/135‑1 (MQ=255)
                                                                                                                      agaTTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTgctcgctc                                 >  2:1526312/1‑150 (MQ=255)
                                                                                                                      agaTTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTgctcgctc                                 >  2:33214/1‑150 (MQ=255)
                                                                                                                                  cGCTTTGCGGCCCATCGCGACacaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggcgcggccttgtgtcgcgatgg                                                                                   >  1:278837‑M1/1‑21 (MQ=255)
                                                                                                                                  cGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGtcc                     <  2:488261/150‑1 (MQ=255)
                                                                                                                                  cGCTTGGCGGCCCATCGCGACacaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcgatgg                                                                                   <  2:278837‑M1/88‑68 (MQ=255)
                                                                                                                                   gCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCATTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGtcca                    >  1:1599574/1‑150 (MQ=255)
                                                                                                                                     tttGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGa                                                        <  2:281176/112‑1 (MQ=255)
                                                                                                                                     tttGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGa                                                        >  1:281176/1‑112 (MQ=255)
                                                                                                                                     tttGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGtccagc                  <  1:885385/150‑1 (MQ=255)
                                                                                                                                     tttGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGtccagc                  >  1:655110/1‑150 (MQ=255)
                                                                                                                                       tGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCCCTATATACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGtccagctc                >  1:1049636/1‑150 (MQ=255)
                                                                                                                                           gCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaac            <  2:1658789‑M2/150‑82 (MQ=255)
                                                                                                                                           gCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGc                                                                <  2:619852/98‑1 (MQ=255)
                                                                                                                                           gCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGc                                                                >  1:619852/1‑98 (MQ=255)
                                                                                                                                            cccATCGCGACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacg           >  1:443476‑M1/1‑11 (MQ=255)
                                                                                                                                            cccATCGCGACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacg           >  2:1566682‑M1/1‑11 (MQ=255)
                                                                                                                                            cccATCGCGACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtggga                                                                                                       <  1:1050520‑M1/58‑48 (MQ=255)
                                                                                                                                            cccATCGCGACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtggga                                                                                                       >  2:1050520‑M1/1‑11 (MQ=255)
                                                                                                                                            cccATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCa           <  1:1796058/150‑1 (MQ=255)
                                                                                                                                             ccATCGCGACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacgc          <  2:1796058‑M1/150‑141 (MQ=255)
                                                                                                                                             ccATCGCGACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacgc          >  2:357565‑M1/1‑10 (MQ=255)
                                                                                                                                             ccATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGTgtcgcgatgggccgccaagcg                                                                        <  2:278837‑M2/88‑22 (MQ=255)
                                                                                                                                             ccATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCAt          <  1:1526312/150‑1 (MQ=255)
                                                                                                                                             ccATCGCGACACAAGGCCGCGCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGTgtcgcgatgggccgcaaagcg                                                                        >  1:278837‑M2/1‑67 (MQ=255)
                                                                                                                                              cATCGCGACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacgcc         >  1:1437523‑M1/1‑9 (MQ=255)
                                                                                                                                              cATCGCGACgcaaggccgctcccacatgggccggcgtgtgacgtgccactgtgggagaggccttgtgtcgcgatgggccgcaaagcggccccaaaaactcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacgcc         >  2:214885‑M1/1‑9 (MQ=255)
                                                                                                                                              cATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATg         <  2:1717653/150‑1 (MQ=255)
                                                                                                                                               aTCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGt        >  1:1379678/1‑150 (MQ=255)
                                                                                                                                                tCGCGACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacgcccc       >  2:380893‑M1/1‑7 (MQ=255)
                                                                                                                                                tCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacgcccc       <  2:1409769‑M2/150‑87 (MQ=255)
                                                                                                                                                tCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGCTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTc       >  1:1546815/1‑150 (MQ=255)
                                                                                                                                                 cgcgACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacgcccca      >  1:1409769‑M2/1‑63 (MQ=255)
                                                                                                                                                   cgACgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacgccccacg    <  1:491881‑M1/150‑147 (MQ=255)
                                                                                                                                                   cgACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTccac    <  1:1749762/150‑1 (MQ=255)
                                                                                                                                                     acacAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTccacca  >  2:161874/1‑150 (MQ=255)
                                                                                                                                                     aCgcaaggccgctcccacatgggccggcgtgtgcagtgccactgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccaaaatctcaaaggctgcgctcctgctccaaccaatccacaaaccgctcgatcaacgccccacgcc  <  1:955364‑M1/150‑149 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
GCTGGAGGGGAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGT‑GGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGTGGCACTGCACACGCCGGCCCATGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCA  >  NC_002947/90208‑90505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.