New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1553726 =60 (0.800)4 (0.060) 4/244 NT 6.3% coding (287/474 nt) PP_1364 hypothetical protein
?NC_002947 1553748 = 61 (0.850)coding (309/474 nt) PP_1364 hypothetical protein

CGTCATCAACTACCTTGTGTCCTCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCAGTCTCCGCGCGAGTACGATGATTTCGTACGTTCGTTGCGCG  >  NC_002947/1553578‑1553875
                                                                                                                                                     |                                                                                                                                                      
cggggcggaaactgaaatagtcgcgcaacgaacgtacgaaatcatcgtactcgcgcggagactgcagcaacataaagcccgaatcgtagtgcccaggcgtctggtcctcgcggcaccacaggcaactggccgtgaggttgacgaactggt                                                                                                                                                        >  1:1565438‑M1/150‑150 (MQ=255)
  gggcggaaactgaaatagtcgcgcaacgaacgtacgaaatcatcgtactcgcgcggagactgcagcagcataaagcccgaatcgtagtgcccaggcgtctggtcctcgcggcaccacaggcaactggccgtgaggttgacgaactggTGc                                                                                                                                                      >  1:766553‑M1/148‑150 (MQ=255)
  gggcggaaactgaaatagtcgcgcaacgaacgtacgaaatcatcgtactcgcgcggagactgcagcagcataaagcccgaatcgtagtgcccaggcgtctggtcctcgcggcaccacaggcaactggccgtgaggttgacgaactggTGc                                                                                                                                                      >  1:767128‑M1/148‑150 (MQ=255)
   ggcggaaactgaaatagtcgcgcaacgaacgtacgaaatcatcgtactcgcgcggagactgcagcagcataaagcccgaatcgtagtgcccaggcgtctggtcctcgcggcaccacaggcaactggccgtgaggttgacgaactggTGcc                                                                                                                                                     <  2:127566‑M1/4‑1 (MQ=255)
   catcaACTACCTTGTGTCCTCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGccc                                                                                                                                                    <  1:685013/150‑1 (MQ=255)
     tcaACTACCTTGTGTCCTCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCcct                                                                                                                                                 <  1:1361130/150‑1 (MQ=255)
      ggaaactgaaatagtcgcgcaacgaacgtacgaaatcatcgtactcgcgcggagactgcagcagcataaagcccgaatcgtagtgcacaggcgtctcggcatagcggcaccacaggcaactggccgtgagggtgacgaactggtgcacgc                                                                                                                                                  <  2:1754548‑M1/7‑5 (MQ=255)
         cTACCTTGTGTCCTCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCcctgcct                                                                                                                                             >  1:998044/1‑150 (MQ=255)
           aCCTTGTGTCCTCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTgg                                                                                                                                           <  2:1427439/150‑1 (MQ=255)
             cTTGTGTCCTCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTggcg                                                                                                                                         >  2:1095540/1‑150 (MQ=255)
                  gtCCTCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTggcggc                                                                                                                                       >  2:1298699/1‑147 (MQ=255)
                  gtCCTCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTggcggc                                                                                                                                       <  1:1298699/147‑1 (MQ=255)
                   tCCNCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGc                                                                                                                                   >  2:1191288/1‑150 (MQ=255)
                     cTCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCAc                                                                                                                                 >  1:870345/1‑150 (MQ=255)
                      tCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCAcc                                                                                                                                >  1:1754480/1‑150 (MQ=255)
                      tCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATACGTAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCAcc                                                                                                                                >  1:1754548/1‑150 (MQ=255)
                       cAAGGTGTTCAACCGCTTTACCGGGCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCa                                                                                                                               <  2:118284/150‑1 (MQ=255)
                           gtgtTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGcc                                                                                                                                                     >  2:1122272/1‑125 (MQ=255)
                           gtgtTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGcc                                                                                                                                                     <  1:1122272/125‑1 (MQ=255)
                           gtgtTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTAGCGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTc                                                                                                                           <  2:168192/150‑1 (MQ=255)
                             gtTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGt                                                                                                                         <  1:1024207/150‑1 (MQ=255)
                                 aagcGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATGAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAAc                                                                                                                     >  2:1765308/4‑150 (MQ=255)
                                 aaCCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAAc                                                                                                                     <  1:4230/150‑1 (MQ=255)
                                 aaCCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAAc                                                                                                                     >  2:1369344/1‑150 (MQ=255)
                                  aCCGCTTTACCGGTAAAGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAAcc                                                                                                                    >  2:78811/1‑150 (MQ=255)
                                        ttACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACgg                                                                                                              <  2:38070/150‑1 (MQ=255)
                                                cAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGc                                                                                                      >  1:620286/1‑150 (MQ=255)
                                                cAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGc                                                                                                      <  2:870345/150‑1 (MQ=255)
                                                   gagaTCGGCCAGCTAGGCAATGCGTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGTCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCtg                                                                                                   >  2:952989/1‑150 (MQ=255)
                                                    agaTCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCtgt                                                                                                  <  2:1725701/150‑1 (MQ=255)
                                                     gaTCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGTGGGCACCAGTTCGTc                                                                                                                        >  1:440798/1‑127 (MQ=255)
                                                     gaTCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGTGGGCACCAGTTCGTc                                                                                                                        <  2:440798/127‑1 (MQ=255)
                                                     gaTCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCtgtg                                                                                                 <  2:420720/150‑1 (MQ=255)
                                                      aTCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTgtgg                                                                                                >  2:1862622/1‑150 (MQ=255)
                                                             aGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGTTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCcgcg                                                                                         >  1:127566/1‑150 (MQ=255)
                                                                 aGGCAATGCCTCTGAAAATGGGTTGATGGTCATGAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGa                                                                                     <  1:1765308/150‑1 (MQ=255)
                                                                  ggCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGAc                                                                                    <  1:1369344/150‑1 (MQ=255)
                                                                     aaTGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAg                                                                                 >  1:143777/1‑150 (MQ=255)
                                                                         ccTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGc                                                                             <  2:786609/150‑1 (MQ=255)
                                                                           tctGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGa                                                                                <  1:1546806/145‑1 (MQ=255)
                                                                           tctGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGa                                                                                >  2:1546806/1‑145 (MQ=255)
                                                                           tctGAAAATGGGTTGATGGTCATAAGCCAGCTGCCCGTGTTGGACAGGCAAGATGACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCt                                                                           >  1:1572975/1‑150 (MQ=255)
                                                                            ctGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTg                                                                          <  1:645211/150‑1 (MQ=255)
                                                                              gAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTggg                                                                        <  1:78811/150‑1 (MQ=255)
                                                                                   tGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTa                                                                   <  2:96029/150‑1 (MQ=255)
                                                                                   tGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGCTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTa                                                                   <  2:985432/150‑1 (MQ=255)
                                                                                      gTTGATGGTCATCAGCCAGCTGCACGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGa                                                                >  2:951323/1‑150 (MQ=255)
                                                                                          aTGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCg                                                            >  1:1193979/1‑150 (MQ=255)
                                                                                            ggTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCggg                                                          >  1:146583/1‑150 (MQ=255)
                                                                                              tcatcaGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCt                                                        >  2:1820925/1‑150 (MQ=255)
                                                                                               catcaGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCtt                                                       <  2:143777/150‑1 (MQ=255)
                                                                                                atcaGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCttt                                                      >  2:720874/1‑150 (MQ=255)
                                                                                                atcaGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCttt                                                      >  1:242251/1‑150 (MQ=255)
                                                                                                 tcaGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCAc                                                                                                                                 >  2:1070036/1‑74 (MQ=255)
                                                                                                 tcaGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCAc                                                                                                                                 <  1:1070036/74‑1 (MQ=255)
                                                                                                 tcaGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTa                                                     >  1:1000746/1‑150 (MQ=255)
                                                                                                    tctagcGGCCCGTGGTGGTCCGGCCCGATTACGTGGCGCAAATTGGGAAGGCCCTGCCTGGCCGGCGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTAtgc                                                  <  1:907531/147‑1 (MQ=255)
                                                                                                     ccagcTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTAtgct                                                 >  2:1477489/1‑150 (MQ=255)
                                                                                                        gcTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTAtgctgct                                              >  1:360380/1‑150 (MQ=255)
                                                                                                        gcTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTAtgctgct                                              <  1:1191288/150‑1 (MQ=255)
                                                                                                        gcTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGACCCAGTCGGCCAACCCCACGGCCAGTGGCCTGGGTGGCCGCGGGGACCAGCCCCCTGGCCCCTACGTTTGGGGCTTTAtcctaga                                              >  2:907531/1‑147 (MQ=255)
                                                                                                           tcgcggcaccacaggcaactggccgtgaggttgacgaactggTGCCCCTGCCTGGCGGCGGGCAc                                                                                                                                 >  2:1845657‑M1/43‑65 (MQ=255)
                                                                                                           tcgcggcaccacaggcaactggccgtgaggttgacgaactggTGCCCCTGCCTGGCGGCGGGCAc                                                                                                                                 <  1:1845657‑M1/23‑1 (MQ=255)
                                                                                                           gCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAAGTGCGTATGCCCCTGCCTAGCGGCGGGCACCAGTTCGTCAACCTCACTGGCAGGTGCCTGTGGTGTCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCa                                           <  2:214570/150‑1 (MQ=255)
                                                                                                                     gTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCCCTACGATTCGGGCTTTATGCTGCTGCAGTCTCcgcgc                                 <  1:1095540/150‑1 (MQ=255)
                                                                                                                     gTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCAGTCTCcgcgc                                 <  2:242251/150‑1 (MQ=255)
                                                                                                                          gCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCAGTCTCCGCGCGAGTa                            <  2:1000746/150‑1 (MQ=255)
                                                                                                                                       gCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCAGTCTCCGCGCGAGTACGATGATTTCGt                <  1:1820925/150‑1 (MQ=255)
                                                                                                                                            aaCTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCAGTCTCCGCGCGAGTACGATGATTTCGTAcgtt           >  2:1538793/1‑150 (MQ=255)
                                                                                                                                             cgaactggTGCCCGCCGCCAGGCAGGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGc                                                                             <  1:849274‑M1/75‑1 (MQ=255)
                                                                                                                                             cgaactggTGCCCGCCGCCAGGCAGGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGc                                                                             >  2:849274‑M1/9‑83 (MQ=255)
                                                                                                                                               tGCGTATGCCCCTGCCTGGCGGCGGGCACCAGATCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCAGTCTCCGCGCGAGTACGATGATTTCGTAcgttcgt        >  2:1070982/1‑150 (MQ=255)
                                                                                                                                                gCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCAGTCTCCGCGCGAGTACGATGATTTCGTAcgttcgtt       <  2:638096/150‑1 (MQ=255)
                                                                                                                                                gCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCAGTCTCCGCGCGAGTACGATGATTTCGTAcgttcgtt       <  1:720874/150‑1 (MQ=255)
                                                                                                                                                    aTGCCCCTGCCTGGCGTCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCAGTCTCCGCGCTAGTACGATGATTTCGTACGTTCGTTgcgc   <  1:952989/150‑1 (MQ=255)
                                                                                                                                                    aTGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACg                                                                                                               <  1:1924505/42‑1 (MQ=255)
                                                                                                                                                    aTGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACg                                                                                                               >  2:1924505/1‑42 (MQ=255)
                                                                                                                                                     TGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCCTTATGCTGCTGCAGTCTCCGCCCGAGTACGATGATTTCGTACGTTCGTTGcgcg  <  2:842473‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CGTCATCAACTACCTTGTGTCCTCAAGGTGTTCAACCGCTTTACCGGTCAGGAGATCGGCCAGCTAGGCAATGCCTCTGAAAATGGGTTGATGGTCATCAGCCAGCTGCCCGTGTTGGTCGGGCCTGATTACGAGCTGCAACTGCGTATGCCCCTGCCTGGCGGCGGGCACCAGTTCGTCAACCTCACGGCCAGTTGCCTGTGGTGCCGCGAGGACCAGACGCCTGGGCACTACGATTCGGGCTTTATGCTGCTGCAGTCTCCGCGCGAGTACGATGATTTCGTACGTTCGTTGCGCG  >  NC_002947/1553578‑1553875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.