New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2529141	71 (0.950)	6 (0.080)	5/246	NT	7.8%	intergenic (+225/‑182)	PP_2217/PP_2218	enoyl‑CoA hydratase/transposase
	?	NC_002947	4909918 =	74 (1.020)					intergenic (+266/+213)	PP_4318/PP_4319	transposase/hypothetical protein

CTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAG  >  NC_002947/2528997‑2529290                                                                                                                                                  |                                                                                                                                                      cTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGga                                                                                                                                                  >  1:994017/1‑150 (MQ=39)  ttCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGgat                                                                                                                                                 >  2:767322/1‑150 (MQ=39)     aggaggCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGgatgat                                                                                                                                              <  1:791964/150‑1 (MQ=38)       gaggCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGAAAGACAGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATgg                                                                                                                                            <  1:42744/150‑1 (MQ=255)         ggCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGa                                                                                                                                          <  1:1592868/150‑1 (MQ=37)           ccGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGc                                                                                                                                        <  2:657621/150‑1 (MQ=38)            cGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGcc                                                                                                                                       >  2:611965/1‑150 (MQ=39)             gagaGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCa                                                                                                                                      >  2:73550/1‑150 (MQ=38)              aGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCTGCGC‑TACGCTCCGGGGttccctcgctacggtctt                                                                                                                                     <  1:1539319‑M1/150‑19 (MQ=255)                      gCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGtttttt                                                                                                                             >  2:300398/1‑150 (MQ=35)                      gCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGtttttt                                                                                                                             <  1:767322/150‑1 (MQ=35)                       ctggCGGAGGGAGGTGACGGGACTGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTg                                                                                                                            <  2:439562/147‑1 (MQ=255)                              agggaggTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACtt                                                                                                                     >  2:1642563/1‑150 (MQ=32)                                    ttGACGGGCATCCATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTc                                                                                                               >  1:725047/2‑150 (MQ=12)                                    gTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTgg                                                                                                                           >  2:1459615/1‑138 (MQ=33)                                    gTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTgg                                                                                                                           <  1:1459615/138‑1 (MQ=33)                                    gTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTc                                                                                                               >  2:1063085/1‑150 (MQ=32)                                      gACAGGCATCCATGCCAGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGGGCGGACTCACGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTGTTTGGTTACTTTTGGTcgc                                                                                                             >  2:859091/1‑150 (MQ=11)                                             atccaTGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTGCTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGAc                                                                                                      <  1:1125589/146‑1 (MQ=17)                                                gATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaa                                                                                                   >  2:1676782/1‑150 (MQ=32)                                                  tGCCCGTCAAGTGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCTGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa                                                                                                 <  1:869533/150‑1 (MQ=17)                                                  tGCCCGTCAAGCGCTGGGGCCCCATGCATGGGGCCGGCAGCGCGTACTCCCGGGAGGAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa                                                                                                 <  1:917873/150‑1 (MQ=255)                                                  tGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa                                                                                                 <  2:678980/150‑1 (MQ=32)                                                  tGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa                                                                                                 <  1:1666468/150‑1 (MQ=32)                                                  tGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa                                                                                                 >  1:481446/1‑150 (MQ=32)                                                    cccGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGt                                                                                               <  2:605774/150‑1 (MQ=32)                                                     ccGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGACCCAGCGTTTTTTGGTTACTTTTTTTCGCGTTTGACAAAAAGTg                                                                                              >  1:405979/1‑150 (MQ=17)                                                       gTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGAc                                                                                            >  2:620451/1‑150 (MQ=32)                                                          aaGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccg                                                                                         >  2:931923/1‑150 (MQ=32)                                                            gcgcTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccgcc                                                                                       >  1:647025/1‑150 (MQ=32)                                                              gcTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCCGGGGCCGGATGATGGGAGCCAGCGTTTTTTGATTACTTTTTTGCGCGTTTCACAAAAAGTAACCCGCCGt                                                                                     >  2:157906/1‑150 (MQ=11)                                                                ggAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTaa                                                                                   <  1:1390674/149‑1 (MQ=17)                                                                   ggCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGATCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAggg                                                                                <  1:1048005/150‑1 (MQ=17)                                                                      cccATGGATGGGGCCTGCAGCGCGTACTCCCGGGCGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCa                                                                             >  2:434221/1‑150 (MQ=21)                                                                       ccATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTTGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt                                                                            >  2:1125777/1‑150 (MQ=25)                                                                       ccATGGATGGGGCCTGCAGCGCGTACTCCCAGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt                                                                            >  2:88173/1‑150 (MQ=21)                                                                        catccatggGGCCT‑CAGCGCTTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAg                                                                                  >  1:794437/6‑142 (MQ=255)                                                                        catccatggGGCCT‑CAGCGCTTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAg                                                                                  <  2:794437/137‑1 (MQ=255)                                                                        cATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATc                                                                           <  1:564610/150‑1 (MQ=35)                                                                         atggatggGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATcc                                                                          >  2:352917/1‑150 (MQ=37)                                                                             atggGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCttt                                                                      <  1:300398/150‑1 (MQ=40)                                                                                 ggCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAg                                                                  <  2:725047/150‑1 (MQ=255)                                                                                 ggCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAg                                                                  <  1:620451/150‑1 (MQ=255)                                                                                 ggCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGAAACGTGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAg                                                                  <  1:1554673/150‑1 (MQ=255)                                                                                   ccTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGt                                                                <  2:994017/150‑1 (MQ=255)                                                                                      gCAGCGCTTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACGGTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCtt                                                             <  2:259852/150‑1 (MQ=255)                                                                                      gCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCtt                                                             >  1:561420/1‑150 (MQ=255)                                                                                       cAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTc                                                            <  1:931923/150‑1 (MQ=255)                                                                                           gcgTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTa                                                        <  1:73550/150‑1 (MQ=255)                                                                                           gcgTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTa                                                        <  1:88173/150‑1 (MQ=255)                                                                                             gTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTTTTTTCTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGa                                                      >  2:1875696/1‑150 (MQ=255)                                                                                                ctcgctggAGCAAGACCGTAGCGAGTGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAAtt                                                   <  1:858132/144‑1 (MQ=255)                                                                                                   ccGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGa                                                                                                                                          >  1:645037/1‑60 (MQ=35)                                                                                                   ccGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGa                                                                                                                                          <  2:645037/60‑1 (MQ=35)                                                                                                   ccGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAggg                                                                                <  2:1533241/118‑1 (MQ=32)                                                                                                   ccGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGc                                                <  2:667012/150‑1 (MQ=255)                                                                                                   ccGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGc                                                <  1:352917/150‑1 (MQ=255)                                                                                                   ccGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGc                                                >  1:685855/1‑150 (MQ=255)                                                                                                   ccGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGc                                                >  1:1098337/1‑150 (MQ=255)                                                                                                   ccGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTGTGACAAAAAGTGACCCGCCGTAAggg                                                                                >  1:1533241/1‑118 (MQ=17)                                                                                                    cGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGGCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCt                                               <  1:1676782/150‑1 (MQ=255)                                                                                                           aaGACCGTAGCGAGGGAACCCCGCAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTTTTTTTTTTTTTTCGCGTTTGACACAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGACATcc                                        >  2:943294/1‑150 (MQ=14)                                                                                                             gACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTTTTTTTTTTTTTTCGCGTTGGACAAAAAGTGACCTGCCTCAAGTGCCTTCCCTTTCAAGGTCTTCGCTTTTTTTCTCTGAAATcccg                                      >  2:395186/1‑148 (MQ=14)                                                                                                                 gTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAg                                  >  2:1394985/1‑150 (MQ=38)                                                                                                                  tAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCatg                                 <  1:611965/150‑3 (MQ=37)                                                                                                                      gAGGGAACCCCGGAGCGTA‑GCGCAGGGGttccctcgctacggtcttgctcccgggagtacgcgctgcaggccccatccat                                                                                                   >  2:1532863‑M1/1‑28 (MQ=255)                                                                                                                      gAGGGAACCCCGGAGCGTA‑GCGCAGGGGttccctcgctacggtcttgctcccgggagtacgcgctgcaggccccatccat                                                                                                   <  1:1532863‑M1/80‑53 (MQ=255)                                                                                                                       aGGGAACCCCGGAGCGTA‑GCGCAGGGGttccctcgctacggtcttgctcccgggagtacgcgctgcaggccccatccatggggcctcagcgcttgacgggcatccatgcccgtcacctcccttcgcaagccctgcgctcggccttctgaa                            >  2:821311‑M1/1‑27 (MQ=255)                                                                                                                         ggAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGAccc                          >  1:1292342/1‑150 (MQ=37)                                                                                                                         ggAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGAccc                          >  1:967615/1‑150 (MQ=37)                                                                                                                           aaCCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGa                        <  1:1394985/150‑1 (MQ=37)                                                                                                                            gccccGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAg                       <  2:647025/149‑1 (MQ=37)                                                                                                                             ccccGGAGCGTA‑GCGCAGGGGttccctcgctacggtcttgctcccgggagtacgcgctgcaggccccatccatggggcctcagcgcttgacgggcat                                                                           <  2:1030715‑M1/97‑77 (MQ=255)                                                                                                                             ccccGGAGCGTA‑GCGCAGGGGttccctcgctacggtcttgctcccgggagtacgcgctgcaggccccatccatggggcctcagcgcttgacgggcat                                                                           >  1:1030715‑M1/1‑21 (MQ=255)                                                                                                                             ccccGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGc                      <  1:62349/150‑1 (MQ=37)                                                                                                                               ccGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGa                    >  1:74888/1‑150 (MQ=37)                                                                                                                                       tA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCt            <  2:1098337/150‑1 (MQ=35)                                                                                                                                           cgcAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGAt         <  1:1642563/150‑1 (MQ=37)                                                                                                                                              aGGGTCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTa      <  1:1149216/150‑1 (MQ=37)                                                                                                                                              aGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTa      <  2:227799/150‑1 (MQ=37)                                                                                                                                               ggggttccctcgctacggtcttgctcccgggagtacgcgctgcaggccccatccatggggcctcagcgcttgacgggcatccatgcccgtcacctcccttcgcaagccctgcgctcggccttctgaagtcgcaatctgcgtcgcctgaac     <  1:121918‑M1/150‑147 (MQ=255)                                                                                                                                               ggggttccctcgctacggtcttgctcccgggagtacgcgctgcaggccccatccatggggcctcagcgcttgacgggcatccatgcccgtcacctcccttcgcaagccctgcgctcggccttctgaagtcgcaatctgcgtcgcctgaac     >  2:21527‑M1/1‑4 (MQ=255)                                                                                                                                                gggttccctcgctacggtcttgctcccgggagtacgcgctgcaggccccatccatggggcctcagcgcttgacgggcatccatgcccgtcacctcccttcgcaagccctgcgctcggccttctgaagtcgcaatctgcgtcgcctgaact    >  2:678254‑M1/1‑3 (MQ=255)                                                                                                                                                 ggttccctcgctacggtcttgctcccgggagtacgcgctgcaggccccatccatgggg                                                                                               <  1:105227‑M1/58‑57 (MQ=255)                                                                                                                                                 ggttccctcgctacggtcttgctcccgggagtacgcgctgcaggccccatccatgggg                                                                                               >  2:105227‑M1/1‑2 (MQ=255)                                                                                                                                                  gCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAg  >  1:677160/1‑150 (MQ=35)                                                                                                                                                  |                                                                                                                                                      CTTCAGGAGGCCGAGCGTAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCGTACTCCCGGGAGCAAGACCGTAGCGAGGGAACCCCGGAGCGTA‑GCGCAGGGGCCGGATGATGGGAGCCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAG  >  NC_002947/2528997‑2529290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.